RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 C3orf84H3BNL1 204 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 H3BQF6 201 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 IGHV3-7P01780 117 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 CD28P10747 220 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 PYY3Q5JQD4 70 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 KPRPQ5T749 579 aaPredicted RBP2.19□□□□□ -2.06
BRCA1-229ENST00000621897 LINC01545Q5VT33 79 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 Q5W150 140 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 WFDC11Q8NEX6 87 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 OR4B1Q8NGF8 309 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 UBALD1Q8TB05 177 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 DIRC1Q969H9 104 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 GABARAPL1Q9H0R8 117 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 SAR1AQ9NR31 198 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 TXNL4BQ9NX01 149 aaKnown RBP2.19□□□□□ -2.06
BRCA1-229ENST00000621897 COMMD3Q9UBI1 195 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 EPDR1Q9UM22 224 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 TMEM14AQ9Y6G1 99 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 CHCHD2Q9Y6H1 151 aaPredicted RBP2.19□□□□□ -2.06
BRCA1-229ENST00000621897 CHD1O14646 1710 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 TEX14Q8IWB6 1497 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 ARHGEF28Q8N1W1 1705 aaKnown RBP2.18□□□□□ -2.06
BRCA1-229ENST00000621897 TRBV20-1A0A075B6N2 111 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 TRBV24-1A0A075B6N3 115 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 A0A0D9SG52 128 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 A0A1W2PP18 115 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 GRIFINA4D1Z8 144 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 K7ERJ3 54 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 GEMIN2O14893 280 aaKnown RBP2.18□□□□□ -2.06
BRCA1-229ENST00000621897 LECT2O14960 151 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 SH2D1AO60880 128 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 KLF7O75840 302 aaPredicted RBP2.18□□□□□ -2.06
BRCA1-229ENST00000621897 HRASP01112 189 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 NPYP01303 97 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 HBDP02042 147 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 SPINK8P0C7L1 97 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 TRGC1P0CF51 173 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 CCL5P13501 91 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 SLC25A16P16260 332 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 ZNF14P17017 642 aaPredicted RBP2.18□□□□□ -2.06
BRCA1-229ENST00000621897 HLA-DMBP28068 263 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 SYCNQ0VAF6 134 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 EIF5AL1Q6IS14 154 aaKnown RBP2.18□□□□□ -2.06
BRCA1-229ENST00000621897 KCNRGQ8N5I3 272 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 SIGLECL1Q8N7X8 197 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 BPIFB6Q8NFQ5 453 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 CLDND2Q8NHS1 167 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 LINC01560Q8TB33 94 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 SCGB3A1Q96QR1 104 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 AGPAT4-IT1Q9H0P7 198 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 SLC35B3Q9H1N7 401 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 ZNF443Q9Y2A4 671 aaPredicted RBP2.18□□□□□ -2.06
BRCA1-229ENST00000621897 DNAJC15Q9Y5T4 150 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 COL1A1P02452 1464 aaPredicted RBP2.18□□□□□ -2.06
BRCA1-229ENST00000621897 FRMPD1Q5SYB0 1578 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 COL18A1P39060 1754 aa2.18□□□□□ -2.06
BRCA1-229ENST00000621897 KDM5DQ9BY66 1539 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 RIMBP3CA6NJZ7 1639 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 RIMBP3BA6NNM3 1639 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 RIMBP3Q9UFD9 1639 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 PLXNB1O43157 2135 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 TCRBV3S1A0A5B6 114 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 SYNGR2O43760 224 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 SLC25A20O43772 301 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 IGKV1D-33P01593 117 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 IGKV1-33P01594 117 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 IGHV1-69P01742 117 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 CD2P06729 351 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 IFITM1P13164 125 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 LSM3P62310 102 aaKnown RBP2.17□□□□□ -2.06
BRCA1-229ENST00000621897 SNRPD3P62318 126 aaKnown RBP2.17□□□□□ -2.06
BRCA1-229ENST00000621897 ZNF90Q03938 601 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 Q56UQ5 140 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 C6orf52Q5T4I8 152 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 MRPL54Q6P161 138 aaKnown RBP2.17□□□□□ -2.06
BRCA1-229ENST00000621897 PATE2Q6UY27 113 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 ZNF705AQ6ZN79 300 aaPredicted RBP2.17□□□□□ -2.06
BRCA1-229ENST00000621897 ADM2Q7Z4H4 148 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 SLC35E3Q7Z769 313 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 BPIFA4PQ86YQ2 179 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 C3orf56Q8N813 242 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 CNEP1R1Q8N9A8 125 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 PFN4Q8NHR9 129 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 SMCR5Q8TEV8 140 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 LINC00526Q96FQ7 95 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 GINS4Q9BRT9 223 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 SEC11CQ9BY50 192 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 TTTY13Q9BZ97 58 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 NOP16Q9Y3C1 178 aaKnown RBP2.17□□□□□ -2.06
BRCA1-229ENST00000621897 CCDC141Q6ZP82 1450 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 PTPRBP23467 1997 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 ZSWIM8A7E2V4 1837 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 ABCC3O15438 1527 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 CRB1P82279 1406 aa2.17□□□□□ -2.06
BRCA1-229ENST00000621897 C3orf85A0A1B0GTC6 90 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 SMIM31A0A1B0GVY4 71 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 TMEM262E9PQX1 116 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 RER1O15258 196 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 YPEL1O60688 119 aa2.16□□□□□ -2.06
BRCA1-229ENST00000621897 TCL1BO95988 128 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms