RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 HLA-DRB4X5D2U9 266 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 TMEM189A5PLL7 270 aa12.29□□□□□ -0.44
GPN1-212ENST00000616939 SRSF2Q01130 221 aaKnown RBP12.29□□□□□ -0.44
GPN1-212ENST00000616939 LYZL1Q6UWQ5 148 aa12.29□□□□□ -0.44
GPN1-212ENST00000616939 RNF5Q99942 180 aa12.29□□□□□ -0.44
GPN1-212ENST00000616939 IGHV3-21A0A0B4J1V1 117 aa12.28□□□□□ -0.44
GPN1-212ENST00000616939 VSTM5A8MXK1 200 aa12.28□□□□□ -0.44
GPN1-212ENST00000616939 FABP2P12104 132 aa12.28□□□□□ -0.44
GPN1-212ENST00000616939 RIPPLY3P57055 190 aa12.28□□□□□ -0.44
GPN1-212ENST00000616939 CCL8P80075 99 aa12.28□□□□□ -0.44
GPN1-212ENST00000616939 PLGLAQ15195 96 aa12.28□□□□□ -0.44
GPN1-212ENST00000616939 PPP1R27Q86WC6 154 aa12.28□□□□□ -0.44
GPN1-212ENST00000616939 ZMAT4Q9H898 229 aa12.28□□□□□ -0.44
GPN1-212ENST00000616939 KLK10O43240 276 aa12.27□□□□□ -0.44
GPN1-212ENST00000616939 SCGB1A1P11684 91 aa12.27□□□□□ -0.44
GPN1-212ENST00000616939 HILPDAQ9Y5L2 63 aa12.27□□□□□ -0.44
GPN1-212ENST00000616939 ARFGEF3Q5TH69 2177 aa12.27□□□□□ -0.44
GPN1-212ENST00000616939 PLXNB1O43157 2135 aa12.27□□□□□ -0.45
GPN1-212ENST00000616939 WI2-2373I1.2A0A1W2PRP0 233 aa12.27□□□□□ -0.45
GPN1-212ENST00000616939 CIDEAO60543 219 aa12.27□□□□□ -0.45
GPN1-212ENST00000616939 NDUFS7O75251 213 aa12.27□□□□□ -0.45
GPN1-212ENST00000616939 SMIM13P0DJ93 91 aa12.27□□□□□ -0.45
GPN1-212ENST00000616939 AMN1Q8IY45 258 aa12.27□□□□□ -0.45
GPN1-212ENST00000616939 CTSZQ9UBR2 303 aa12.27□□□□□ -0.45
GPN1-212ENST00000616939 TMEM213A2RRL7 107 aa12.26□□□□□ -0.45
GPN1-212ENST00000616939 SH2D1AO60880 128 aa12.26□□□□□ -0.45
GPN1-212ENST00000616939 RBP4P02753 201 aa12.26□□□□□ -0.45
GPN1-212ENST00000616939 CNTFRP26992 372 aa12.26□□□□□ -0.45
GPN1-212ENST00000616939 ADIPOQQ15848 244 aa12.26□□□□□ -0.45
GPN1-212ENST00000616939 LYPD2Q6UXB3 125 aa12.26□□□□□ -0.45
GPN1-212ENST00000616939 TMEM108Q6UXF1 575 aa12.26□□□□□ -0.45
GPN1-212ENST00000616939 LOC389332A0A1B0GUA5 103 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 K7EIM0 57 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 IGLV1-47P01700 117 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 ZNF491Q8N8L2 437 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 RNF125Q96EQ8 232 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 C8orf49Q96NF6 230 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 RAB1BQ9H0U4 201 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 IGHV3-72A0A0B4J1Y9 119 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 IGHV1-3A0A0C4DH29 117 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 IGLC6P0CF74 106 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 ZNF48Q96MX3 618 aaPredicted RBP12.25□□□□□ -0.45
GPN1-212ENST00000616939 AAMDCQ9H7C9 122 aa12.25□□□□□ -0.45
GPN1-212ENST00000616939 PLCE1Q9P212 2302 aa12.24□□□□□ -0.45
GPN1-212ENST00000616939 NPYP01303 97 aa12.24□□□□□ -0.45
GPN1-212ENST00000616939 SRSF1Q07955 248 aaKnown RBP eCLIP12.24□□□□□ -0.45
GPN1-212ENST00000616939 SAMD5Q5TGI4 173 aa12.24□□□□□ -0.45
GPN1-212ENST00000616939 PCP2Q8IVA1 136 aa12.24□□□□□ -0.45
GPN1-212ENST00000616939 TPPP3Q9BW30 176 aa12.24□□□□□ -0.45
GPN1-212ENST00000616939 SMPXQ9UHP9 88 aa12.24□□□□□ -0.45
GPN1-212ENST00000616939 EVI2AP22794 236 aa12.23□□□□□ -0.45
GPN1-212ENST00000616939 CKS2P33552 79 aa12.23□□□□□ -0.45
GPN1-212ENST00000616939 CNFNQ9BYD5 112 aa12.23□□□□□ -0.45
GPN1-212ENST00000616939 MAP1LC3AQ9H492 121 aa12.23□□□□□ -0.45
GPN1-212ENST00000616939 MALRD1Q5VYJ5 2156 aa12.23□□□□□ -0.45
GPN1-212ENST00000616939 FCER1GP30273 86 aa12.23□□□□□ -0.45
GPN1-212ENST00000616939 NMUP48645 174 aa12.23□□□□□ -0.45
GPN1-212ENST00000616939 C22orf34Q6ZV56 151 aa12.23□□□□□ -0.45
GPN1-212ENST00000616939 URB1O60287 2271 aaKnown RBP12.22□□□□□ -0.45
GPN1-212ENST00000616939 BMI1P35226 326 aa12.22□□□□□ -0.45
GPN1-212ENST00000616939 FAM27E3Q08E93 113 aa12.22□□□□□ -0.45
GPN1-212ENST00000616939 SRSF6Q13247 344 aaKnown RBP12.22□□□□□ -0.45
GPN1-212ENST00000616939 ODF1Q14990 250 aa12.22□□□□□ -0.45
GPN1-212ENST00000616939 PHLDA1Q8WV24 401 aaPredicted RBP12.22□□□□□ -0.45
GPN1-212ENST00000616939 RAB37Q96AX2 223 aa12.22□□□□□ -0.45
GPN1-212ENST00000616939 NXT2Q9NPJ8 142 aaKnown RBP12.22□□□□□ -0.45
GPN1-212ENST00000616939 BUB1B-PAK6H3BSN5 160 aa12.21□□□□□ -0.45
GPN1-212ENST00000616939 APELAP0DMC3 54 aa12.21□□□□□ -0.45
GPN1-212ENST00000616939 IGFL3Q6UXB1 125 aa12.21□□□□□ -0.45
GPN1-212ENST00000616939 NAA38Q9BRA0 125 aaKnown RBP12.21□□□□□ -0.45
GPN1-212ENST00000616939 TM2D2Q9BX73 214 aa12.21□□□□□ -0.45
GPN1-212ENST00000616939 FBXL15Q9H469 300 aa12.21□□□□□ -0.45
GPN1-212ENST00000616939 DKK2Q9UBU2 259 aa12.21□□□□□ -0.45
GPN1-212ENST00000616939 PRUNE2Q8WUY3 3088 aa12.21□□□□□ -0.45
GPN1-212ENST00000616939 M0R3E3 92 aa12.21□□□□□ -0.46
GPN1-212ENST00000616939 ATP5LO75964 103 aa12.21□□□□□ -0.46
GPN1-212ENST00000616939 S100A7P31151 101 aa12.21□□□□□ -0.46
GPN1-212ENST00000616939 TAL2Q16559 108 aa12.21□□□□□ -0.46
GPN1-212ENST00000616939 PRSS33Q8NF86 280 aa12.21□□□□□ -0.46
GPN1-212ENST00000616939 PSMG3-AS1Q96PY0 264 aa12.21□□□□□ -0.46
GPN1-212ENST00000616939 PRR25Q96S07 402 aa12.21□□□□□ -0.46
GPN1-212ENST00000616939 CHAC1Q9BUX1 264 aa12.21□□□□□ -0.46
GPN1-212ENST00000616939 IL4P05112 153 aa12.2□□□□□ -0.46
GPN1-212ENST00000616939 BCL6BQ8N143 479 aaPredicted RBP12.2□□□□□ -0.46
GPN1-212ENST00000616939 RNF185Q96GF1 192 aa12.2□□□□□ -0.46
GPN1-212ENST00000616939 ASCL2Q99929 193 aa12.2□□□□□ -0.46
GPN1-212ENST00000616939 FCGR2BP31994 310 aaPredicted RBP12.19□□□□□ -0.46
GPN1-212ENST00000616939 FXYD2P54710 66 aa12.19□□□□□ -0.46
GPN1-212ENST00000616939 SAMD13Q5VXD3 122 aa12.19□□□□□ -0.46
GPN1-212ENST00000616939 VGLL1Q99990 258 aa12.19□□□□□ -0.46
GPN1-212ENST00000616939 HHLA3Q9XRX5 114 aa12.19□□□□□ -0.46
GPN1-212ENST00000616939 NDUFS8O00217 210 aa12.18□□□□□ -0.46
GPN1-212ENST00000616939 IGKCP01834 107 aa12.18□□□□□ -0.46
GPN1-212ENST00000616939 ZNF562Q6V9R5 426 aa12.18□□□□□ -0.46
GPN1-212ENST00000616939 CCL17Q92583 94 aa12.18□□□□□ -0.46
GPN1-212ENST00000616939 FRYLO94915 3013 aa12.18□□□□□ -0.46
GPN1-212ENST00000616939 TMSB15BA0A087X1C1 80 aa12.18□□□□□ -0.46
GPN1-212ENST00000616939 E9PLD3 99 aa12.18□□□□□ -0.46
GPN1-212ENST00000616939 LY6LH3BQJ8 138 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms