RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 AP3S1Q92572 193 aa11.77□□□□□ -0.53
CSNK1E-215ENST00000612795 A0A087WTM6 91 aa11.76□□□□□ -0.53
CSNK1E-215ENST00000612795 NXPH4O95158 308 aa11.76□□□□□ -0.53
CSNK1E-215ENST00000612795 TMEM182Q6ZP80 229 aaPredicted RBP11.76□□□□□ -0.53
CSNK1E-215ENST00000612795 RPUSD4Q96CM3 377 aaKnown RBP11.76□□□□□ -0.53
CSNK1E-215ENST00000612795 PRRT1Q99946 306 aa11.76□□□□□ -0.53
CSNK1E-215ENST00000612795 SHANK2-AS3Q9BTD1 123 aa11.76□□□□□ -0.53
CSNK1E-215ENST00000612795 TNFRSF18Q9Y5U5 241 aa11.76□□□□□ -0.53
CSNK1E-215ENST00000612795 GCSHP23434 173 aa11.75□□□□□ -0.53
CSNK1E-215ENST00000612795 SSBP1Q04837 148 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-215ENST00000612795 KIR3DS1Q14943 382 aa11.75□□□□□ -0.53
CSNK1E-215ENST00000612795 VSIG2Q96IQ7 327 aa11.75□□□□□ -0.53
CSNK1E-215ENST00000612795 HIGD1AQ9Y241 93 aa11.75□□□□□ -0.53
CSNK1E-215ENST00000612795 A0A087X0K7 114 aa11.74□□□□□ -0.53
CSNK1E-215ENST00000612795 AKAIN1P0CW23 69 aa11.74□□□□□ -0.53
CSNK1E-215ENST00000612795 ANXA3P12429 323 aa11.74□□□□□ -0.53
CSNK1E-215ENST00000612795 SRPXP78539 464 aa11.74□□□□□ -0.53
CSNK1E-215ENST00000612795 GFI1BQ5VTD9 330 aa11.74□□□□□ -0.53
CSNK1E-215ENST00000612795 Q6ZTI0 123 aa11.74□□□□□ -0.53
CSNK1E-215ENST00000612795 TMED4Q7Z7H5 227 aa11.74□□□□□ -0.53
CSNK1E-215ENST00000612795 CCDC190Q86UF4 302 aa11.74□□□□□ -0.53
CSNK1E-215ENST00000612795 PARD6GQ9BYG4 376 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-215ENST00000612795 TRGV2A0A075B6R0 118 aa11.73□□□□□ -0.53
CSNK1E-215ENST00000612795 OR5G3P0C626 314 aa11.73□□□□□ -0.53
CSNK1E-215ENST00000612795 RPP30P78346 268 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-215ENST00000612795 OR51S1Q8NGJ8 323 aa11.73□□□□□ -0.53
CSNK1E-215ENST00000612795 FUNDC2Q9BWH2 189 aa11.73□□□□□ -0.53
CSNK1E-215ENST00000612795 PRSS46E5RG02 174 aa11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 J3KRW8 73 aa11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 HYPMO75409 117 aa11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 MED6O75586 246 aa11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 ATP6V1G2O95670 118 aa11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 IL5P05113 134 aa11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 MRPS10P82664 201 aaKnown RBP11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 CLVS1Q8IUQ0 354 aaPredicted RBP11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 SCGB3A2Q96PL1 93 aa11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 CIB3Q96Q77 187 aaPredicted RBP11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 ICOSQ9Y6W8 199 aa11.72□□□□□ -0.53
CSNK1E-215ENST00000612795 A0A087WXM4 84 aa11.71□□□□□ -0.53
CSNK1E-215ENST00000612795 PIGBOS1A0A0B4J2F0 54 aa11.71□□□□□ -0.53
CSNK1E-215ENST00000612795 SMCO3A2RU48 225 aa11.71□□□□□ -0.53
CSNK1E-215ENST00000612795 LINC00869P0C866 280 aa11.71□□□□□ -0.53
CSNK1E-215ENST00000612795 CYP2G1PQ6ZSU1 146 aa11.71□□□□□ -0.53
CSNK1E-215ENST00000612795 ACOT7LQ6ZUV0 252 aa11.71□□□□□ -0.53
CSNK1E-215ENST00000612795 TRAV9-2A0A087WT02 112 aa11.7□□□□□ -0.54
CSNK1E-215ENST00000612795 PITX3O75364 302 aa11.7□□□□□ -0.54
CSNK1E-215ENST00000612795 ANXA7P20073 488 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-215ENST00000612795 DAZ2Q13117 558 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-215ENST00000612795 SPANXN5Q5MJ07 72 aa11.7□□□□□ -0.54
CSNK1E-215ENST00000612795 LCN15Q6UWW0 184 aa11.7□□□□□ -0.54
CSNK1E-215ENST00000612795 S100A7AQ86SG5 101 aa11.7□□□□□ -0.54
CSNK1E-215ENST00000612795 SMIM4Q8WVI0 70 aa11.7□□□□□ -0.54
CSNK1E-215ENST00000612795 SCP2D1Q9UJQ7 156 aa11.7□□□□□ -0.54
CSNK1E-215ENST00000612795 TRAV12-3A0A0B4J271 114 aa11.69□□□□□ -0.54
CSNK1E-215ENST00000612795 DUXBA0A1W2PPF3 345 aa11.69□□□□□ -0.54
CSNK1E-215ENST00000612795 PMS2P5A8MQ11 134 aa11.69□□□□□ -0.54
CSNK1E-215ENST00000612795 WRBO00258 174 aa11.69□□□□□ -0.54
CSNK1E-215ENST00000612795 CXCL2P19875 107 aa11.69□□□□□ -0.54
CSNK1E-215ENST00000612795 PYGO2Q9BRQ0 406 aa11.69□□□□□ -0.54
CSNK1E-215ENST00000612795 SLC50A1Q9BRV3 221 aa11.69□□□□□ -0.54
CSNK1E-215ENST00000612795 TMEM70Q9BUB7 260 aa11.69□□□□□ -0.54
CSNK1E-215ENST00000612795 LY96Q9Y6Y9 160 aa11.69□□□□□ -0.54
CSNK1E-215ENST00000612795 IGLV5-52A0A0A0MRZ9 124 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 TRGV1A0A0A0MS02 117 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 NPIPB6E9PJ23 425 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 H3BP45 60 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 RGS5O15539 181 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 PAX4O43316 350 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 SYNGR2O43760 224 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 LINC00467Q9BRT7 94 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 ZNF331Q9NQX6 463 aaPredicted RBP11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 MCUBQ9NWR8 336 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 RNF24Q9Y225 148 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 FUT9Q9Y231 359 aa11.68□□□□□ -0.54
CSNK1E-215ENST00000612795 LEPP41159 167 aa11.67□□□□□ -0.54
CSNK1E-215ENST00000612795 ZNF680Q8NEM1 530 aa11.67□□□□□ -0.54
CSNK1E-215ENST00000612795 GSN-AS1Q9NRJ2 163 aa11.67□□□□□ -0.54
CSNK1E-215ENST00000612795 STRAPQ9Y3F4 350 aaKnown RBP11.67□□□□□ -0.54
CSNK1E-215ENST00000612795 SNRPCP09234 159 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-215ENST00000612795 PLP1P60201 277 aa11.66□□□□□ -0.54
CSNK1E-215ENST00000612795 SELENOTP62341 195 aa11.66□□□□□ -0.54
CSNK1E-215ENST00000612795 SYT8Q8NBV8 401 aa11.66□□□□□ -0.54
CSNK1E-215ENST00000612795 ARL6Q9H0F7 186 aa11.66□□□□□ -0.54
CSNK1E-215ENST00000612795 ARV1Q9H2C2 271 aa11.66□□□□□ -0.54
CSNK1E-215ENST00000612795 MIXL1Q9H2W2 232 aa11.66□□□□□ -0.54
CSNK1E-215ENST00000612795 PRAC2D3DTV9 90 aa11.65□□□□□ -0.54
CSNK1E-215ENST00000612795 ZNF324O75467 553 aaPredicted RBP11.65□□□□□ -0.54
CSNK1E-215ENST00000612795 SLC25A6P12236 298 aa11.65□□□□□ -0.54
CSNK1E-215ENST00000612795 IL18Q14116 193 aa11.65□□□□□ -0.54
CSNK1E-215ENST00000612795 ANKRD20A5PA0PJZ0 165 aa11.64□□□□□ -0.55
CSNK1E-215ENST00000612795 KRTAP29-1A8MX34 341 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-215ENST00000612795 MRPS12O15235 138 aaKnown RBP11.64□□□□□ -0.55
CSNK1E-215ENST00000612795 IGHV3-53P01767 116 aa11.64□□□□□ -0.55
CSNK1E-215ENST00000612795 PLA2G1BP04054 148 aaKnown RBP11.64□□□□□ -0.55
CSNK1E-215ENST00000612795 EVI2AP22794 236 aa11.64□□□□□ -0.55
CSNK1E-215ENST00000612795 LYPD5Q6UWN5 251 aa11.64□□□□□ -0.55
CSNK1E-215ENST00000612795 ODF3Q96PU9 254 aa11.64□□□□□ -0.55
CSNK1E-215ENST00000612795 LINC00854A0A1B0GVQ3 168 aa11.63□□□□□ -0.55
CSNK1E-215ENST00000612795 H3BTX0 84 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms