RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 B4DSR2 109 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 IGLC1P0CG04 106 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 ASIPP42127 132 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 Q86TA4 180 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 SIGLEC15Q6ZMC9 328 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 FBLL1A6NHQ2 334 aaKnown RBP10.48□□□□□ -0.73
TCF3-220ENST00000611869 PSG3Q16557 428 aa10.48□□□□□ -0.73
TCF3-220ENST00000611869 IGHV2-70DA0A0C4DH43 119 aa10.48□□□□□ -0.73
TCF3-220ENST00000611869 E7EUB6 86 aa10.48□□□□□ -0.73
TCF3-220ENST00000611869 ZNF138P52744 262 aa10.48□□□□□ -0.73
TCF3-220ENST00000611869 ADORA2A-AS1P86434 159 aa10.48□□□□□ -0.73
TCF3-220ENST00000611869 LCN12Q6JVE5 192 aa10.48□□□□□ -0.73
TCF3-220ENST00000611869 LYZL1Q6UWQ5 148 aa10.48□□□□□ -0.73
TCF3-220ENST00000611869 V9GYV3 84 aa10.48□□□□□ -0.73
TCF3-220ENST00000611869 KMT2EQ8IZD2 1858 aa10.48□□□□□ -0.73
TCF3-220ENST00000611869 ZNF56Q15929 161 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 C11orf52Q96A22 123 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 NCR2O95944 276 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 CR1LQ2VPA4 569 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 MORN5Q5VZ52 161 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 SYT8Q8NBV8 401 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 P0C879 139 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 SRSF9Q13242 221 aaKnown RBP eCLIP10.47□□□□□ -0.73
TCF3-220ENST00000611869 Q1RN00 199 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 LBHQ53QV2 105 aaPredicted RBP10.47□□□□□ -0.73
TCF3-220ENST00000611869 FXYD5Q96DB9 178 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 CGB3P0DN86 165 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 CGB7P0DN87 165 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 TSPOP30536 169 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
TCF3-220ENST00000611869 IGKV1OR2-108A0A075B7D4 117 aa10.46□□□□□ -0.73
TCF3-220ENST00000611869 TCF21O43680 179 aa10.46□□□□□ -0.73
TCF3-220ENST00000611869 EVI2AP22794 236 aa10.46□□□□□ -0.73
TCF3-220ENST00000611869 C8orf31Q8N9H6 132 aa10.46□□□□□ -0.73
TCF3-220ENST00000611869 A0A0C4DFX4 3053 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 K7EN84 100 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 TYMSP04818 313 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 HERVK_113P61574 105 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 C12orf54Q6X4T0 127 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 THAP8Q8NA92 274 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 PRSS22Q9GZN4 317 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 TRBV19A0A075B6N1 114 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 A6NDN8 102 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 SH2D1AO60880 128 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 C1orf229Q6ZS94 237 aaPredicted RBP10.46□□□□□ -0.74
TCF3-220ENST00000611869 LYPD1Q8N2G4 141 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 MIEN1Q9BRT3 115 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 TMEM160Q9NX00 188 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 SONP18583 2426 aaKnown RBP10.46□□□□□ -0.74
TCF3-220ENST00000611869 WNK1Q9H4A3 2382 aa10.46□□□□□ -0.74
TCF3-220ENST00000611869 MYO18BQ8IUG5 2567 aa10.45□□□□□ -0.74
TCF3-220ENST00000611869 YPEL3P61236 119 aaPredicted RBP10.45□□□□□ -0.74
TCF3-220ENST00000611869 A0A1W2PRX2 142 aa10.45□□□□□ -0.74
TCF3-220ENST00000611869 D6R8Y8 96 aa10.45□□□□□ -0.74
TCF3-220ENST00000611869 H3BVH4 76 aa10.45□□□□□ -0.74
TCF3-220ENST00000611869 TMEM249Q2WGJ8 235 aa10.45□□□□□ -0.74
TCF3-220ENST00000611869 OR4X2Q8NGF9 303 aa10.45□□□□□ -0.74
TCF3-220ENST00000611869 CDH23Q9H251 3354 aa10.45□□□□□ -0.74
TCF3-220ENST00000611869 NAV3Q8IVL0 2385 aa10.45□□□□□ -0.74
TCF3-220ENST00000611869 ARMS2P0C7Q2 107 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 FXYD7P58549 80 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 ERCC8Q13216 396 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 FAM120AOSQ5T036 256 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 ZNF664Q8N3J9 261 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 KIAA1549Q9HCM3 1950 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 TRBV7-1A0A0A6YYK4 115 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 C3orf79P0CE67 100 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 GCSHP23434 173 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 RNF182Q8N6D2 247 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 RASL11AQ6T310 242 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 FAM110DQ8TAY7 271 aaPredicted RBP10.44□□□□□ -0.74
TCF3-220ENST00000611869 RAB37Q96AX2 223 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 MSMBP08118 114 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 C17orf77Q96MU5 243 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 ATG2AQ2TAZ0 1938 aa10.44□□□□□ -0.74
TCF3-220ENST00000611869 CD7P09564 240 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 CPAMD8Q8IZJ3 1885 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 RAX2Q96IS3 184 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 KIR2DL4Q99706 377 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 FOXC2Q99958 501 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 MRPL36Q9P0J6 103 aaKnown RBP10.43□□□□□ -0.74
TCF3-220ENST00000611869 TLN2Q9Y4G6 2542 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 IGHV1-69DA0A0B4J2H0 117 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 IGHV1-69P01742 117 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 ARHGAP32A7KAX9 2087 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 HCFC1P51610 2035 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 EXPH5Q8NEV8 1989 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 TRAV8-6A0A0B4J262 113 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 TRAV21A0A0B4J279 112 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 LEPP41159 167 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 ZNF491Q8N8L2 437 aa10.43□□□□□ -0.74
TCF3-220ENST00000611869 IGLV1-47P01700 117 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 PDE6HQ13956 83 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 PATE2Q6UY27 113 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 DMRTC2Q8IXT2 367 aaPredicted RBP10.42□□□□□ -0.74
TCF3-220ENST00000611869 TRAV9-2A0A087WT02 112 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 OVOL3O00110 214 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 ZNF688P0C7X2 276 aa10.42□□□□□ -0.74
TCF3-220ENST00000611869 SLAQ13239 276 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms