RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CTSGP08311 255 aa17.73■□□□□ 0.43
SRRM1-222ENST00000596378 PIP4P2Q8N4L2 257 aa17.73■□□□□ 0.43
SRRM1-222ENST00000596378 TMUB1Q9BVT8 246 aa17.73■□□□□ 0.43
SRRM1-222ENST00000596378 PSG8Q9UQ74 426 aa17.73■□□□□ 0.43
SRRM1-222ENST00000596378 TEX43Q6ZNM6 134 aa17.72■□□□□ 0.43
SRRM1-222ENST00000596378 NIT1Q86X76 327 aa17.72■□□□□ 0.43
SRRM1-222ENST00000596378 TMEM75Q8N9X5 138 aa17.72■□□□□ 0.43
SRRM1-222ENST00000596378 RNF24Q9Y225 148 aa17.72■□□□□ 0.43
SRRM1-222ENST00000596378 ABCA2Q9BZC7 2435 aa17.72■□□□□ 0.43
SRRM1-222ENST00000596378 DIRC3C9JPN6 131 aa17.72■□□□□ 0.43
SRRM1-222ENST00000596378 RBPMS2Q6ZRY4 209 aaKnown RBP17.72■□□□□ 0.43
SRRM1-222ENST00000596378 LURAP1LQ8IV03 231 aa17.72■□□□□ 0.43
SRRM1-222ENST00000596378 Q8N976 141 aa17.72■□□□□ 0.43
SRRM1-222ENST00000596378 ATP6V0E1O15342 81 aa17.71■□□□□ 0.43
SRRM1-222ENST00000596378 IGHV4-39P01824 125 aa17.71■□□□□ 0.43
SRRM1-222ENST00000596378 PSG3Q16557 428 aa17.71■□□□□ 0.43
SRRM1-222ENST00000596378 PAM16Q9Y3D7 125 aa17.71■□□□□ 0.43
SRRM1-222ENST00000596378 IGHV3OR16-10A0A075B7F0 116 aa17.71■□□□□ 0.43
SRRM1-222ENST00000596378 LINC01548A6NM66 108 aa17.71■□□□□ 0.43
SRRM1-222ENST00000596378 FOXA3P55318 350 aaPredicted RBP17.71■□□□□ 0.43
SRRM1-222ENST00000596378 UNQ5815/PRO19632Q6UWF5 114 aa17.71■□□□□ 0.43
SRRM1-222ENST00000596378 LYPD1Q8N2G4 141 aa17.71■□□□□ 0.43
SRRM1-222ENST00000596378 C1RLQ9NZP8 487 aa17.71■□□□□ 0.43
SRRM1-222ENST00000596378 PIEZO1Q92508 2521 aa17.71■□□□□ 0.42
SRRM1-222ENST00000596378 C8orf49Q96NF6 230 aa17.7■□□□□ 0.42
SRRM1-222ENST00000596378 A0A1B0GV90 55 aa17.7■□□□□ 0.42
SRRM1-222ENST00000596378 GFRA4Q9GZZ7 299 aa17.7■□□□□ 0.42
SRRM1-222ENST00000596378 MAP1AP78559 2803 aaPredicted RBP17.69■□□□□ 0.42
SRRM1-222ENST00000596378 CRIP1P50238 77 aa17.69■□□□□ 0.42
SRRM1-222ENST00000596378 TRBV6-1A0A0K0K1D8 114 aa17.69■□□□□ 0.42
SRRM1-222ENST00000596378 G3V318 75 aa17.69■□□□□ 0.42
SRRM1-222ENST00000596378 K7EQM0 130 aa17.69■□□□□ 0.42
SRRM1-222ENST00000596378 OVOL3O00110 214 aa17.69■□□□□ 0.42
SRRM1-222ENST00000596378 GPR183P32249 361 aa17.69■□□□□ 0.42
SRRM1-222ENST00000596378 KLF5Q13887 457 aaPredicted RBP17.69■□□□□ 0.42
SRRM1-222ENST00000596378 C15orf32Q32M92 178 aa17.69■□□□□ 0.42
SRRM1-222ENST00000596378 IGFL4Q6B9Z1 124 aa17.69■□□□□ 0.42
SRRM1-222ENST00000596378 RNASEKQ6P5S7 137 aaKnown RBP17.69■□□□□ 0.42
SRRM1-222ENST00000596378 M0QZ24 198 aa17.68■□□□□ 0.42
SRRM1-222ENST00000596378 NPFFO15130 113 aa17.68■□□□□ 0.42
SRRM1-222ENST00000596378 C16orf54Q6UWD8 224 aa17.68■□□□□ 0.42
SRRM1-222ENST00000596378 AAMDCQ9H7C9 122 aa17.68■□□□□ 0.42
SRRM1-222ENST00000596378 EREGO14944 169 aa17.67■□□□□ 0.42
SRRM1-222ENST00000596378 C3orf79P0CE67 100 aa17.67■□□□□ 0.42
SRRM1-222ENST00000596378 ZFP30Q9Y2G7 519 aa17.67■□□□□ 0.42
SRRM1-222ENST00000596378 CENPVL3A0A0U1RRI6 287 aa17.67■□□□□ 0.42
SRRM1-222ENST00000596378 OR4B1Q8NGF8 309 aa17.67■□□□□ 0.42
SRRM1-222ENST00000596378 FAM110DQ8TAY7 271 aaPredicted RBP17.67■□□□□ 0.42
SRRM1-222ENST00000596378 IGKV2-40A0A087WW87 121 aaPredicted RBP17.66■□□□□ 0.42
SRRM1-222ENST00000596378 HSBP1O75506 76 aa17.66■□□□□ 0.42
SRRM1-222ENST00000596378 IGKV2D-40P01614 121 aaPredicted RBP17.66■□□□□ 0.42
SRRM1-222ENST00000596378 PDE6HQ13956 83 aa17.66■□□□□ 0.42
SRRM1-222ENST00000596378 URB1-AS1Q96HZ7 61 aa17.66■□□□□ 0.42
SRRM1-222ENST00000596378 VAMP8Q9BV40 100 aa17.66■□□□□ 0.42
SRRM1-222ENST00000596378 RABAC1Q9UI14 185 aa17.66■□□□□ 0.42
SRRM1-222ENST00000596378 SMAD5-AS1Q9Y6J3 95 aa17.66■□□□□ 0.42
SRRM1-222ENST00000596378 APOHP02749 345 aaPredicted RBP17.66■□□□□ 0.42
SRRM1-222ENST00000596378 RHOGP84095 191 aa17.66■□□□□ 0.42
SRRM1-222ENST00000596378 S100A7AQ86SG5 101 aa17.66■□□□□ 0.42
SRRM1-222ENST00000596378 TMEM219Q86XT9 240 aa17.66■□□□□ 0.42
SRRM1-222ENST00000596378 SOX21Q9Y651 276 aaPredicted RBP17.66■□□□□ 0.42
SRRM1-222ENST00000596378 HLA-DMBP28068 263 aa17.65■□□□□ 0.42
SRRM1-222ENST00000596378 FLNCQ14315 2725 aa17.65■□□□□ 0.42
SRRM1-222ENST00000596378 ZNF502Q8TBZ5 544 aa17.65■□□□□ 0.42
SRRM1-222ENST00000596378 FAM231BA6NCW3 169 aa17.64■□□□□ 0.41
SRRM1-222ENST00000596378 CHEK1O14757 476 aa17.64■□□□□ 0.41
SRRM1-222ENST00000596378 ARMS2P0C7Q2 107 aa17.64■□□□□ 0.41
SRRM1-222ENST00000596378 RPL7P18124 248 aaKnown RBP17.64■□□□□ 0.41
SRRM1-222ENST00000596378 CELSR2Q9HCU4 2923 aa17.64■□□□□ 0.41
SRRM1-222ENST00000596378 CLEC3BP05452 202 aa17.64■□□□□ 0.41
SRRM1-222ENST00000596378 PMCHL1Q16048 86 aa17.64■□□□□ 0.41
SRRM1-222ENST00000596378 TPPP3Q9BW30 176 aa17.64■□□□□ 0.41
SRRM1-222ENST00000596378 M0R2Z0 102 aa17.63■□□□□ 0.41
SRRM1-222ENST00000596378 BORCS7Q96B45 105 aa17.63■□□□□ 0.41
SRRM1-222ENST00000596378 CACNA1AO00555 2505 aa17.63■□□□□ 0.41
SRRM1-222ENST00000596378 CSN1S1P47710 185 aa17.63■□□□□ 0.41
SRRM1-222ENST00000596378 PSG9Q00887 426 aa17.62■□□□□ 0.41
SRRM1-222ENST00000596378 BRD3OSQ6XYD6 125 aa17.62■□□□□ 0.41
SRRM1-222ENST00000596378 ZNF705AQ6ZN79 300 aaPredicted RBP17.62■□□□□ 0.41
SRRM1-222ENST00000596378 TXN2Q99757 166 aa17.62■□□□□ 0.41
SRRM1-222ENST00000596378 C20orf144Q9BQM9 153 aa17.62■□□□□ 0.41
SRRM1-222ENST00000596378 SNHG12Q9BXW3 62 aa17.62■□□□□ 0.41
SRRM1-222ENST00000596378 IGSF10Q6WRI0 2623 aa17.62■□□□□ 0.41
SRRM1-222ENST00000596378 UTP20O75691 2785 aaKnown RBP17.61■□□□□ 0.41
SRRM1-222ENST00000596378 TMSB15BA0A087X1C1 80 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 IGHV3-66A0A0C4DH42 116 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 HAX1O00165 279 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 SCGB2A1O75556 95 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 LCN12Q6JVE5 192 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 Q8TAT8 98 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 CCDC140Q96MF4 163 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 LOC102724200A0A096LPH7 203 aaPredicted RBP17.61■□□□□ 0.41
SRRM1-222ENST00000596378 IGHV4-61A0A0C4DH41 118 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 SSTP61278 116 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 CLEC19AQ6UXS0 136 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 C2orf88Q9BSF0 95 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 LINC00527Q9UJ94 153 aa17.61■□□□□ 0.41
SRRM1-222ENST00000596378 FAM181BA6NEQ2 426 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 IGHG4P01861 327 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 CRYBG3Q68DQ2 2970 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms