RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 SPOCK3Q9BQ16 436 aa11.25□□□□□ -0.61
RANBP3-229ENST00000592771 USP9XQ93008 2570 aaPredicted RBP11.24□□□□□ -0.61
RANBP3-229ENST00000592771 HAX1O00165 279 aa11.24□□□□□ -0.61
RANBP3-229ENST00000592771 TOX4O94842 621 aa11.24□□□□□ -0.61
RANBP3-229ENST00000592771 EBLN2Q6P2I7 272 aa11.24□□□□□ -0.61
RANBP3-229ENST00000592771 S100A7AQ86SG5 101 aa11.24□□□□□ -0.61
RANBP3-229ENST00000592771 TMEM70Q9BUB7 260 aa11.24□□□□□ -0.61
RANBP3-229ENST00000592771 WNT10AQ9GZT5 417 aa11.24□□□□□ -0.61
RANBP3-229ENST00000592771 A0A1B0GW15 77 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 I3L2K1 104 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 APELAP0DMC3 54 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 BATFQ16520 125 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 TCF24Q7RTU0 167 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 Q86TA4 180 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 OR2D3Q8NGH3 330 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 GTSF1Q8WW33 167 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 SSBP4Q9BWG4 385 aaPredicted RBP11.23□□□□□ -0.61
RANBP3-229ENST00000592771 SLC25A39Q9BZJ4 359 aaPredicted RBP11.23□□□□□ -0.61
RANBP3-229ENST00000592771 TACC2O95359 2948 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 ABCA1O95477 2261 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 PSG1P11464 419 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 PLA2G2AP14555 144 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 CD24P25063 80 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 TSPOP30536 169 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
RANBP3-229ENST00000592771 CCL19Q99731 98 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 RASL11BQ9BPW5 248 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 MYO18BQ8IUG5 2567 aa11.23□□□□□ -0.61
RANBP3-229ENST00000592771 ABCA2Q9BZC7 2435 aa11.22□□□□□ -0.61
RANBP3-229ENST00000592771 CNIH1O95406 144 aa11.22□□□□□ -0.61
RANBP3-229ENST00000592771 COL8A1P27658 744 aa11.22□□□□□ -0.61
RANBP3-229ENST00000592771 TMEM75Q8N9X5 138 aa11.22□□□□□ -0.61
RANBP3-229ENST00000592771 GATD1Q8NB37 220 aa11.22□□□□□ -0.61
RANBP3-229ENST00000592771 RPH3ALQ9UNE2 315 aa11.22□□□□□ -0.61
RANBP3-229ENST00000592771 J3QKU1 62 aa11.21□□□□□ -0.61
RANBP3-229ENST00000592771 K7EQM0 130 aa11.21□□□□□ -0.61
RANBP3-229ENST00000592771 CHEK1O14757 476 aa11.21□□□□□ -0.61
RANBP3-229ENST00000592771 LYZP61626 148 aa11.21□□□□□ -0.61
RANBP3-229ENST00000592771 SRSF1Q07955 248 aaKnown RBP eCLIP11.21□□□□□ -0.61
RANBP3-229ENST00000592771 HES1Q14469 280 aa11.21□□□□□ -0.61
RANBP3-229ENST00000592771 ZNF562Q6V9R5 426 aa11.21□□□□□ -0.61
RANBP3-229ENST00000592771 BPIFA4PQ86YQ2 179 aa11.21□□□□□ -0.61
RANBP3-229ENST00000592771 URB1-AS1Q96HZ7 61 aa11.21□□□□□ -0.61
RANBP3-229ENST00000592771 PGLYRP4Q96LB8 373 aa11.21□□□□□ -0.61
RANBP3-229ENST00000592771 COL12A1Q99715 3063 aa11.21□□□□□ -0.61
RANBP3-229ENST00000592771 LOC102724200A0A096LPH7 203 aaPredicted RBP11.21□□□□□ -0.62
RANBP3-229ENST00000592771 NDUFS8O00217 210 aa11.21□□□□□ -0.62
RANBP3-229ENST00000592771 Q56UQ5 140 aa11.21□□□□□ -0.62
RANBP3-229ENST00000592771 Q6AWC8 147 aa11.21□□□□□ -0.62
RANBP3-229ENST00000592771 C10orf105Q8TEF2 133 aa11.21□□□□□ -0.62
RANBP3-229ENST00000592771 ORAOV1Q8WV07 137 aa11.21□□□□□ -0.62
RANBP3-229ENST00000592771 PIMREGQ9BSJ6 248 aa11.21□□□□□ -0.62
RANBP3-229ENST00000592771 SHANK2-AS3Q9BTD1 123 aa11.21□□□□□ -0.62
RANBP3-229ENST00000592771 ST20Q9HBF5 79 aa11.21□□□□□ -0.62
RANBP3-229ENST00000592771 K7EIM0 57 aa11.2□□□□□ -0.62
RANBP3-229ENST00000592771 IGLV2-11P01706 119 aa11.2□□□□□ -0.62
RANBP3-229ENST00000592771 LCN12Q6JVE5 192 aa11.2□□□□□ -0.62
RANBP3-229ENST00000592771 OR4F17Q8NGA8 305 aa11.2□□□□□ -0.62
RANBP3-229ENST00000592771 FLNCQ14315 2725 aa11.2□□□□□ -0.62
RANBP3-229ENST00000592771 TRBV19A0A075B6N1 114 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 TRAV30A0A087WSZ9 112 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.19□□□□□ -0.62
RANBP3-229ENST00000592771 NPIPB5A8MRT5 1133 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 H3BRN7 92 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 APOHP02749 345 aaPredicted RBP11.19□□□□□ -0.62
RANBP3-229ENST00000592771 SAA4P35542 130 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 PAX8Q06710 450 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 FAM120AOSQ5T036 256 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 ASPHD1Q5U4P2 390 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 IGHV3-21A0A0B4J1V1 117 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 LEPROTL1O95214 131 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 IGKV1-17P01599 117 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 NPSP0C0P6 89 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 IGLL1P15814 213 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 TMEM11P17152 192 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 NDPQ00604 133 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 RIGQ13278 110 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 PET117Q6UWS5 81 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 ARL6IP6Q8N6S5 226 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 STPG4Q8N801 248 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
RANBP3-229ENST00000592771 IGHV4-61A0A0C4DH41 118 aa11.18□□□□□ -0.62
RANBP3-229ENST00000592771 A0A1B0GUT8 65 aa11.18□□□□□ -0.62
RANBP3-229ENST00000592771 SERTM2A0A1B0GWG4 89 aa11.18□□□□□ -0.62
RANBP3-229ENST00000592771 SYS1-DBNDD2H3BUS1 97 aa11.18□□□□□ -0.62
RANBP3-229ENST00000592771 PDE6HQ13956 83 aa11.18□□□□□ -0.62
RANBP3-229ENST00000592771 LEMD1Q68G75 181 aa11.18□□□□□ -0.62
RANBP3-229ENST00000592771 GOLT1AQ6ZVE7 132 aa11.18□□□□□ -0.62
RANBP3-229ENST00000592771 ARPC1AQ92747 370 aa11.18□□□□□ -0.62
RANBP3-229ENST00000592771 ZNF48Q96MX3 618 aaPredicted RBP11.18□□□□□ -0.62
RANBP3-229ENST00000592771 HSPB8Q9UJY1 196 aa11.18□□□□□ -0.62
RANBP3-229ENST00000592771 IGHV1-24A0A0C4DH33 117 aa11.17□□□□□ -0.62
RANBP3-229ENST00000592771 NPFFO15130 113 aa11.17□□□□□ -0.62
RANBP3-229ENST00000592771 FAM106CPP0CH98 169 aa11.17□□□□□ -0.62
RANBP3-229ENST00000592771 PRNTQ86SH4 94 aa11.17□□□□□ -0.62
RANBP3-229ENST00000592771 ATOH7Q8N100 152 aa11.17□□□□□ -0.62
RANBP3-229ENST00000592771 TTC9CQ8N5M4 171 aa11.17□□□□□ -0.62
RANBP3-229ENST00000592771 Q8N9W7 124 aa11.17□□□□□ -0.62
RANBP3-229ENST00000592771 IGLV11-55A0A075B6I3 123 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms