RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 SIVA1O15304 175 aa13.47□□□□□ -0.25
PRKCSH-216ENST00000592445 RPUSD4Q96CM3 377 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-216ENST00000592445 C18orf15Q96N68 181 aa13.47□□□□□ -0.25
PRKCSH-216ENST00000592445 C20orf144Q9BQM9 153 aa13.47□□□□□ -0.25
PRKCSH-216ENST00000592445 TMPRSS5Q9H3S3 457 aa13.47□□□□□ -0.25
PRKCSH-216ENST00000592445 HIGD1AQ9Y241 93 aa13.47□□□□□ -0.25
PRKCSH-216ENST00000592445 FLG2Q5D862 2391 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-216ENST00000592445 MED6O75586 246 aa13.46□□□□□ -0.25
PRKCSH-216ENST00000592445 SMR3BP02814 79 aaPredicted RBP13.46□□□□□ -0.25
PRKCSH-216ENST00000592445 KRTAP10-1P60331 282 aa13.46□□□□□ -0.25
PRKCSH-216ENST00000592445 SMIM4Q8WVI0 70 aa13.46□□□□□ -0.25
PRKCSH-216ENST00000592445 CIB3Q96Q77 187 aaPredicted RBP13.46□□□□□ -0.25
PRKCSH-216ENST00000592445 MDFICQ9P1T7 246 aa13.46□□□□□ -0.25
PRKCSH-216ENST00000592445 SCP2D1Q9UJQ7 156 aa13.46□□□□□ -0.25
PRKCSH-216ENST00000592445 PIGBOS1A0A0B4J2F0 54 aa13.45□□□□□ -0.26
PRKCSH-216ENST00000592445 RGS5O15539 181 aa13.45□□□□□ -0.26
PRKCSH-216ENST00000592445 PITX3O75364 302 aa13.45□□□□□ -0.26
PRKCSH-216ENST00000592445 HYPMO75409 117 aa13.45□□□□□ -0.26
PRKCSH-216ENST00000592445 IL5P05113 134 aa13.45□□□□□ -0.26
PRKCSH-216ENST00000592445 ICAM4Q14773 271 aa13.45□□□□□ -0.26
PRKCSH-216ENST00000592445 KIR3DS1Q14943 382 aa13.45□□□□□ -0.26
PRKCSH-216ENST00000592445 A0A087X0K7 114 aa13.44□□□□□ -0.26
PRKCSH-216ENST00000592445 A0A096LPF7 62 aa13.44□□□□□ -0.26
PRKCSH-216ENST00000592445 PRSS46E5RG02 174 aa13.44□□□□□ -0.26
PRKCSH-216ENST00000592445 FAM229AH3BQW9 127 aa13.44□□□□□ -0.26
PRKCSH-216ENST00000592445 WRBO00258 174 aa13.44□□□□□ -0.26
PRKCSH-216ENST00000592445 OR5G3P0C626 314 aa13.44□□□□□ -0.26
PRKCSH-216ENST00000592445 SMCO3A2RU48 225 aa13.43□□□□□ -0.26
PRKCSH-216ENST00000592445 SPANXN5Q5MJ07 72 aa13.43□□□□□ -0.26
PRKCSH-216ENST00000592445 GFI1BQ5VTD9 330 aa13.43□□□□□ -0.26
PRKCSH-216ENST00000592445 CYP2G1PQ6ZSU1 146 aa13.43□□□□□ -0.26
PRKCSH-216ENST00000592445 ACOT7LQ6ZUV0 252 aa13.43□□□□□ -0.26
PRKCSH-216ENST00000592445 CCDC190Q86UF4 302 aa13.43□□□□□ -0.26
PRKCSH-216ENST00000592445 PARD6GQ9BYG4 376 aaPredicted RBP13.43□□□□□ -0.26
PRKCSH-216ENST00000592445 MIXL1Q9H2W2 232 aa13.43□□□□□ -0.26
PRKCSH-216ENST00000592445 MCUBQ9NWR8 336 aa13.43□□□□□ -0.26
PRKCSH-216ENST00000592445 TNFRSF18Q9Y5U5 241 aa13.43□□□□□ -0.26
PRKCSH-216ENST00000592445 DUXBA0A1W2PPF3 345 aa13.42□□□□□ -0.26
PRKCSH-216ENST00000592445 J3QL48 77 aa13.42□□□□□ -0.26
PRKCSH-216ENST00000592445 NXPH4O95158 308 aa13.42□□□□□ -0.26
PRKCSH-216ENST00000592445 DNAH10OSP0CZ25 163 aa13.42□□□□□ -0.26
PRKCSH-216ENST00000592445 ANXA7P20073 488 aaKnown RBP13.42□□□□□ -0.26
PRKCSH-216ENST00000592445 Q6ZTI0 123 aa13.42□□□□□ -0.26
PRKCSH-216ENST00000592445 S100A7AQ86SG5 101 aa13.42□□□□□ -0.26
PRKCSH-216ENST00000592445 NFE4Q86UQ8 179 aa13.42□□□□□ -0.26
PRKCSH-216ENST00000592445 VSIG2Q96IQ7 327 aa13.42□□□□□ -0.26
PRKCSH-216ENST00000592445 TRGV2A0A075B6R0 118 aa13.41□□□□□ -0.26
PRKCSH-216ENST00000592445 A0A087WTM6 91 aa13.41□□□□□ -0.26
PRKCSH-216ENST00000592445 J3KRW8 73 aa13.41□□□□□ -0.26
PRKCSH-216ENST00000592445 SYNGR2O43760 224 aa13.41□□□□□ -0.26
PRKCSH-216ENST00000592445 LINC00869P0C866 280 aa13.41□□□□□ -0.26
PRKCSH-216ENST00000592445 TMED4Q7Z7H5 227 aa13.41□□□□□ -0.26
PRKCSH-216ENST00000592445 ANKRD20A5PA0PJZ0 165 aa13.4□□□□□ -0.26
PRKCSH-216ENST00000592445 PMS2P5A8MQ11 134 aa13.4□□□□□ -0.26
PRKCSH-216ENST00000592445 H3BP45 60 aa13.4□□□□□ -0.26
PRKCSH-216ENST00000592445 SLC25A6P12236 298 aa13.4□□□□□ -0.26
PRKCSH-216ENST00000592445 IL18Q14116 193 aa13.4□□□□□ -0.26
PRKCSH-216ENST00000592445 NAA50Q9GZZ1 169 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-216ENST00000592445 STRAPQ9Y3F4 350 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-216ENST00000592445 CTDSP2O14595 271 aa13.39□□□□□ -0.27
PRKCSH-216ENST00000592445 DAZ2Q13117 558 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-216ENST00000592445 CTF1Q16619 201 aa13.39□□□□□ -0.27
PRKCSH-216ENST00000592445 Q6ZSN1 163 aa13.39□□□□□ -0.27
PRKCSH-216ENST00000592445 TRAV12-3A0A0B4J271 114 aa13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 CTDSPLO15194 276 aa13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 SNRPCP09234 159 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 CXCL2P19875 107 aa13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 GCSHP23434 173 aa13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 PLP1P60201 277 aa13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 SELENOTP62341 195 aa13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 LCN15Q6UWW0 184 aa13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 SLC50A1Q9BRV3 221 aa13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 ARL6Q9H0F7 186 aa13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 ZNF331Q9NQX6 463 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 RNF24Q9Y225 148 aa13.38□□□□□ -0.27
PRKCSH-216ENST00000592445 PRAC2D3DTV9 90 aa13.37□□□□□ -0.27
PRKCSH-216ENST00000592445 HAMPP81172 84 aa13.37□□□□□ -0.27
PRKCSH-216ENST00000592445 DIRAS2Q96HU8 199 aa13.37□□□□□ -0.27
PRKCSH-216ENST00000592445 PYGO2Q9BRQ0 406 aa13.37□□□□□ -0.27
PRKCSH-216ENST00000592445 ICOSQ9Y6W8 199 aa13.37□□□□□ -0.27
PRKCSH-216ENST00000592445 TRAV9-2A0A087WT02 112 aa13.36□□□□□ -0.27
PRKCSH-216ENST00000592445 VAMP1P23763 118 aa13.36□□□□□ -0.27
PRKCSH-216ENST00000592445 ARV1Q9H2C2 271 aa13.36□□□□□ -0.27
PRKCSH-216ENST00000592445 RABL2AQ9UBK7 228 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-216ENST00000592445 RABL2BQ9UNT1 228 aa13.36□□□□□ -0.27
PRKCSH-216ENST00000592445 TRGV1A0A0A0MS02 117 aa13.35□□□□□ -0.27
PRKCSH-216ENST00000592445 MRPS12O15235 138 aaKnown RBP13.35□□□□□ -0.27
PRKCSH-216ENST00000592445 PAX4O43316 350 aa13.35□□□□□ -0.27
PRKCSH-216ENST00000592445 LEPP41159 167 aa13.35□□□□□ -0.27
PRKCSH-216ENST00000592445 TMEM128Q5BJH2 165 aa13.35□□□□□ -0.27
PRKCSH-216ENST00000592445 PATE2Q6UY27 113 aa13.35□□□□□ -0.27
PRKCSH-216ENST00000592445 LRTM2Q8N967 370 aa13.35□□□□□ -0.27
PRKCSH-216ENST00000592445 GSN-AS1Q9NRJ2 163 aa13.35□□□□□ -0.27
PRKCSH-216ENST00000592445 FUT9Q9Y231 359 aa13.35□□□□□ -0.27
PRKCSH-216ENST00000592445 ZNF680Q8NEM1 530 aa13.34□□□□□ -0.27
PRKCSH-216ENST00000592445 H3BTX0 84 aa13.33□□□□□ -0.28
PRKCSH-216ENST00000592445 HOXB5P09067 269 aa13.33□□□□□ -0.28
PRKCSH-216ENST00000592445 CT45A10P0DMU9 189 aa13.33□□□□□ -0.28
PRKCSH-216ENST00000592445 RRAS2P62070 204 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-216ENST00000592445 LINC00305Q7Z4B0 112 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 207.5 ms