RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 IGLC2P0DOY2 106 aa12.47□□□□□ -0.41
GCDH-213ENST00000590627 HIST1H1EP10412 219 aaKnown RBP12.47□□□□□ -0.41
GCDH-213ENST00000590627 GCHFRP30047 84 aa12.47□□□□□ -0.41
GCDH-213ENST00000590627 C9orf66Q5T8R8 295 aa12.47□□□□□ -0.41
GCDH-213ENST00000590627 TCF24Q7RTU0 167 aa12.47□□□□□ -0.41
GCDH-213ENST00000590627 DYNLRB2Q8TF09 96 aa12.47□□□□□ -0.41
GCDH-213ENST00000590627 FXYD5Q96DB9 178 aa12.47□□□□□ -0.41
GCDH-213ENST00000590627 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
GCDH-213ENST00000590627 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 TEX46H3BTG2 121 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 SAP30O75446 220 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 IGLV1-51P01701 117 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 NMBP08949 121 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 PYYP10082 97 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 MEOX2P50222 304 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 GUK1Q16774 197 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 OR2K2Q8NGT1 345 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 C17orf77Q96MU5 243 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 U3KQK5 164 aa12.46□□□□□ -0.41
GCDH-213ENST00000590627 STAB2Q8WWQ8 2551 aa12.45□□□□□ -0.42
GCDH-213ENST00000590627 H3BQ15 152 aa12.45□□□□□ -0.42
GCDH-213ENST00000590627 ATF4P18848 351 aaPredicted RBP12.45□□□□□ -0.42
GCDH-213ENST00000590627 FGF8P55075 233 aaPredicted RBP12.45□□□□□ -0.42
GCDH-213ENST00000590627 UBE2L3P68036 154 aaKnown RBP12.45□□□□□ -0.42
GCDH-213ENST00000590627 PMS2P11Q13670 270 aa12.45□□□□□ -0.42
GCDH-213ENST00000590627 TMEM167BQ9NRX6 74 aa12.45□□□□□ -0.42
GCDH-213ENST00000590627 TRBV19A0A075B6N1 114 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 ZNF785A8K8V0 405 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 TSPAN4O14817 238 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 ZNF253O75346 499 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 OR10J4P0C629 311 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 NBEAP1P0C6P0 100 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 PSMB3P49720 205 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 RAB14P61106 215 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 PDE6HQ13956 83 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 CD300EQ496F6 205 aaPredicted RBP12.44□□□□□ -0.42
GCDH-213ENST00000590627 TMEM61Q8N0U2 210 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 NRN1Q9NPD7 142 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 ZNF586Q9NXT0 402 aa12.44□□□□□ -0.42
GCDH-213ENST00000590627 TRAV2A0A0B4J234 112 aa12.43□□□□□ -0.42
GCDH-213ENST00000590627 CCL20P78556 96 aa12.43□□□□□ -0.42
GCDH-213ENST00000590627 CLLU1Q5K131 121 aa12.43□□□□□ -0.42
GCDH-213ENST00000590627 SAMD13Q5VXD3 122 aa12.43□□□□□ -0.42
GCDH-213ENST00000590627 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.43□□□□□ -0.42
GCDH-213ENST00000590627 TMPRSS5Q9H3S3 457 aa12.43□□□□□ -0.42
GCDH-213ENST00000590627 PPT1P50897 306 aa12.42□□□□□ -0.42
GCDH-213ENST00000590627 RPL11P62913 178 aaKnown RBP12.42□□□□□ -0.42
GCDH-213ENST00000590627 RBPMS2Q6ZRY4 209 aaKnown RBP12.42□□□□□ -0.42
GCDH-213ENST00000590627 PRR25Q96S07 402 aa12.42□□□□□ -0.42
GCDH-213ENST00000590627 MS4A6AQ9H2W1 248 aa12.42□□□□□ -0.42
GCDH-213ENST00000590627 HUWE1Q7Z6Z7 4374 aaKnown RBP12.42□□□□□ -0.42
GCDH-213ENST00000590627 SOCS3O14543 225 aa12.41□□□□□ -0.42
GCDH-213ENST00000590627 NDUFB4O95168 129 aa12.41□□□□□ -0.42
GCDH-213ENST00000590627 PAFAH1B2P68402 229 aa12.41□□□□□ -0.42
GCDH-213ENST00000590627 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
GCDH-213ENST00000590627 DCANP1Q8TF63 244 aa12.41□□□□□ -0.42
GCDH-213ENST00000590627 SPAG8Q99932 426 aaPredicted RBP12.41□□□□□ -0.42
GCDH-213ENST00000590627 SELENOKQ9Y6D0 94 aa12.41□□□□□ -0.42
GCDH-213ENST00000590627 ARL2-SNX15V9GYD0 113 aa12.41□□□□□ -0.42
GCDH-213ENST00000590627 A0A1B0GV50 99 aa12.4□□□□□ -0.42
GCDH-213ENST00000590627 C3orf84H3BNL1 204 aa12.4□□□□□ -0.42
GCDH-213ENST00000590627 K7EQG2 157 aa12.4□□□□□ -0.42
GCDH-213ENST00000590627 LCN12Q6JVE5 192 aa12.4□□□□□ -0.42
GCDH-213ENST00000590627 IQCF2Q8IXL9 164 aa12.4□□□□□ -0.42
GCDH-213ENST00000590627 BLNKQ8WV28 456 aa12.4□□□□□ -0.42
GCDH-213ENST00000590627 PCNPQ8WW12 178 aaKnown RBP12.4□□□□□ -0.42
GCDH-213ENST00000590627 SLC50A1Q9BRV3 221 aa12.4□□□□□ -0.42
GCDH-213ENST00000590627 ZNF331Q9NQX6 463 aaPredicted RBP12.4□□□□□ -0.42
GCDH-213ENST00000590627 ZNF256Q9Y2P7 627 aaPredicted RBP12.4□□□□□ -0.42
GCDH-213ENST00000590627 A0A1W2PRE2 83 aa12.39□□□□□ -0.43
GCDH-213ENST00000590627 IZUMO1RA6ND01 250 aa12.39□□□□□ -0.43
GCDH-213ENST00000590627 H3BTX0 84 aa12.39□□□□□ -0.43
GCDH-213ENST00000590627 SLC17A3O00476 420 aa12.39□□□□□ -0.43
GCDH-213ENST00000590627 ISLRO14498 428 aa12.39□□□□□ -0.43
GCDH-213ENST00000590627 SNRPCP09234 159 aaKnown RBP12.39□□□□□ -0.43
GCDH-213ENST00000590627 PSG9Q00887 426 aa12.39□□□□□ -0.43
GCDH-213ENST00000590627 GBGT1Q8N5D6 347 aa12.39□□□□□ -0.43
GCDH-213ENST00000590627 MANBALQ9NQG1 85 aa12.39□□□□□ -0.43
GCDH-213ENST00000590627 CLEC5AQ9NY25 188 aa12.39□□□□□ -0.43
GCDH-213ENST00000590627 SORL1Q92673 2214 aa12.38□□□□□ -0.43
GCDH-213ENST00000590627 DYNC2H1Q8NCM8 4307 aaKnown RBP12.38□□□□□ -0.43
GCDH-213ENST00000590627 IGKV3-7A0A075B6H7 116 aa12.38□□□□□ -0.43
GCDH-213ENST00000590627 TRAV8-2A0A0B4J237 113 aa12.38□□□□□ -0.43
GCDH-213ENST00000590627 FAM74A7A6NL05 159 aa12.38□□□□□ -0.43
GCDH-213ENST00000590627 DNASE2O00115 360 aaPredicted RBP12.38□□□□□ -0.43
GCDH-213ENST00000590627 TAGLN2P37802 199 aaKnown RBP12.38□□□□□ -0.43
GCDH-213ENST00000590627 NKX6-2Q9C056 277 aaPredicted RBP12.38□□□□□ -0.43
GCDH-213ENST00000590627 OR4C46A6NHA9 309 aa12.37□□□□□ -0.43
GCDH-213ENST00000590627 ID1P41134 155 aa12.37□□□□□ -0.43
GCDH-213ENST00000590627 RANP62826 216 aaKnown RBP12.37□□□□□ -0.43
GCDH-213ENST00000590627 C16orf92Q96LL3 132 aa12.37□□□□□ -0.43
GCDH-213ENST00000590627 OTORQ9NRC9 128 aa12.37□□□□□ -0.43
GCDH-213ENST00000590627 GNG13Q9P2W3 67 aa12.37□□□□□ -0.43
GCDH-213ENST00000590627 YTHDF2Q9Y5A9 579 aaKnown RBP12.37□□□□□ -0.43
GCDH-213ENST00000590627 DNAH7Q8WXX0 4024 aa12.37□□□□□ -0.43
GCDH-213ENST00000590627 PAGE4O60829 102 aa12.36□□□□□ -0.43
GCDH-213ENST00000590627 IFNA1P01562 189 aa12.36□□□□□ -0.43
GCDH-213ENST00000590627 GUCA2BQ16661 112 aa12.36□□□□□ -0.43
GCDH-213ENST00000590627 WFDC3Q8IUB2 231 aa12.36□□□□□ -0.43
GCDH-213ENST00000590627 MRPL53Q96EL3 112 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms