RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 SSX7Q7RTT5 188 aa18.85■□□□□ 0.61
CIRBP-223ENST00000589266 HBE1P02100 147 aa18.84■□□□□ 0.61
CIRBP-223ENST00000589266 CD300EQ496F6 205 aaPredicted RBP18.84■□□□□ 0.61
CIRBP-223ENST00000589266 SFT2D1Q8WV19 159 aa18.84■□□□□ 0.61
CIRBP-223ENST00000589266 ZNF503Q96F45 646 aa18.84■□□□□ 0.61
CIRBP-223ENST00000589266 B9D2Q9BPU9 175 aa18.84■□□□□ 0.61
CIRBP-223ENST00000589266 SMAD5-AS1Q9Y6J3 95 aa18.84■□□□□ 0.61
CIRBP-223ENST00000589266 ZNF785A8K8V0 405 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 ARL14EPLP0DKL9 152 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 KRTAP10-11P60412 298 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 PAFAH1B2P68402 229 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 IFITM2Q01629 132 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 LCN12Q6JVE5 192 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 LCN15Q6UWW0 184 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 TMEM61Q8N0U2 210 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 SUN5Q8TC36 379 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 FXYD5Q96DB9 178 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 SPAG8Q99932 426 aaPredicted RBP18.83■□□□□ 0.6
CIRBP-223ENST00000589266 NRN1Q9NPD7 142 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 TMEM167BQ9NRX6 74 aa18.83■□□□□ 0.6
CIRBP-223ENST00000589266 ZNF253O75346 499 aa18.82■□□□□ 0.6
CIRBP-223ENST00000589266 GCHFRP30047 84 aa18.82■□□□□ 0.6
CIRBP-223ENST00000589266 RPL11P62913 178 aaKnown RBP18.82■□□□□ 0.6
CIRBP-223ENST00000589266 PDE6HQ13956 83 aa18.82■□□□□ 0.6
CIRBP-223ENST00000589266 HMGB3O15347 200 aaKnown RBP18.81■□□□□ 0.6
CIRBP-223ENST00000589266 PYYP10082 97 aa18.81■□□□□ 0.6
CIRBP-223ENST00000589266 UBE2L3P68036 154 aaKnown RBP18.81■□□□□ 0.6
CIRBP-223ENST00000589266 NBEAP1P0C6P0 100 aa18.8■□□□□ 0.6
CIRBP-223ENST00000589266 PSMB3P49720 205 aa18.8■□□□□ 0.6
CIRBP-223ENST00000589266 MS4A6AQ9H2W1 248 aa18.8■□□□□ 0.6
CIRBP-223ENST00000589266 H3BQ15 152 aa18.79■□□□□ 0.6
CIRBP-223ENST00000589266 EIF3GO75821 320 aaKnown RBP eCLIP18.79■□□□□ 0.6
CIRBP-223ENST00000589266 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.79■□□□□ 0.6
CIRBP-223ENST00000589266 LYPD6BQ8NI32 183 aa18.79■□□□□ 0.6
CIRBP-223ENST00000589266 C17orf77Q96MU5 243 aa18.79■□□□□ 0.6
CIRBP-223ENST00000589266 SLC50A1Q9BRV3 221 aa18.79■□□□□ 0.6
CIRBP-223ENST00000589266 ZNF586Q9NXT0 402 aa18.79■□□□□ 0.6
CIRBP-223ENST00000589266 CLEC5AQ9NY25 188 aa18.79■□□□□ 0.6
CIRBP-223ENST00000589266 ZMAT5Q9UDW3 170 aaKnown RBP18.79■□□□□ 0.6
CIRBP-223ENST00000589266 TRBV19A0A075B6N1 114 aa18.78■□□□□ 0.6
CIRBP-223ENST00000589266 OR10J4P0C629 311 aa18.78■□□□□ 0.6
CIRBP-223ENST00000589266 PPT1P50897 306 aa18.78■□□□□ 0.6
CIRBP-223ENST00000589266 PMS2P11Q13670 270 aa18.78■□□□□ 0.6
CIRBP-223ENST00000589266 DCANP1Q8TF63 244 aa18.78■□□□□ 0.6
CIRBP-223ENST00000589266 OR4C46A6NHA9 309 aa18.77■□□□□ 0.6
CIRBP-223ENST00000589266 DNASE2O00115 360 aaPredicted RBP18.77■□□□□ 0.6
CIRBP-223ENST00000589266 RGS13O14921 159 aa18.77■□□□□ 0.6
CIRBP-223ENST00000589266 FGF8P55075 233 aaPredicted RBP18.77■□□□□ 0.6
CIRBP-223ENST00000589266 RAB14P61106 215 aa18.77■□□□□ 0.6
CIRBP-223ENST00000589266 EGFEM1PQ0D2K5 195 aa18.77■□□□□ 0.6
CIRBP-223ENST00000589266 LYPD1Q8N2G4 141 aa18.77■□□□□ 0.6
CIRBP-223ENST00000589266 K7EQG2 157 aa18.76■□□□□ 0.59
CIRBP-223ENST00000589266 ISLRO14498 428 aa18.76■□□□□ 0.59
CIRBP-223ENST00000589266 SOCS3O14543 225 aa18.76■□□□□ 0.59
CIRBP-223ENST00000589266 PSG9Q00887 426 aa18.76■□□□□ 0.59
CIRBP-223ENST00000589266 ARL2-SNX15V9GYD0 113 aa18.76■□□□□ 0.59
CIRBP-223ENST00000589266 IZUMO1RA6ND01 250 aa18.75■□□□□ 0.59
CIRBP-223ENST00000589266 NMBP08949 121 aa18.75■□□□□ 0.59
CIRBP-223ENST00000589266 ID1P41134 155 aa18.75■□□□□ 0.59
CIRBP-223ENST00000589266 SELENOKQ9Y6D0 94 aa18.75■□□□□ 0.59
CIRBP-223ENST00000589266 IGKV3-7A0A075B6H7 116 aa18.74■□□□□ 0.59
CIRBP-223ENST00000589266 CMC4P56277 68 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-223ENST00000589266 IQCF2Q8IXL9 164 aa18.74■□□□□ 0.59
CIRBP-223ENST00000589266 GBGT1Q8N5D6 347 aa18.74■□□□□ 0.59
CIRBP-223ENST00000589266 ZNF331Q9NQX6 463 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-223ENST00000589266 ZNF256Q9Y2P7 627 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-223ENST00000589266 A0A1W2PRE2 83 aa18.73■□□□□ 0.59
CIRBP-223ENST00000589266 NDUFB4O95168 129 aa18.73■□□□□ 0.59
CIRBP-223ENST00000589266 GUCA2BQ16661 112 aa18.73■□□□□ 0.59
CIRBP-223ENST00000589266 BLNKQ8WV28 456 aa18.73■□□□□ 0.59
CIRBP-223ENST00000589266 C16orf92Q96LL3 132 aa18.73■□□□□ 0.59
CIRBP-223ENST00000589266 NKX6-2Q9C056 277 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-223ENST00000589266 TMPRSS5Q9H3S3 457 aa18.73■□□□□ 0.59
CIRBP-223ENST00000589266 STAB2Q8WWQ8 2551 aa18.73■□□□□ 0.59
CIRBP-223ENST00000589266 NHLRC4P0CG21 123 aaPredicted RBP18.72■□□□□ 0.59
CIRBP-223ENST00000589266 CLLU1Q5K131 121 aa18.72■□□□□ 0.59
CIRBP-223ENST00000589266 FAM110AQ9BQ89 295 aa18.72■□□□□ 0.59
CIRBP-223ENST00000589266 MANBALQ9NQG1 85 aa18.72■□□□□ 0.59
CIRBP-223ENST00000589266 U3KQK5 164 aa18.72■□□□□ 0.59
CIRBP-223ENST00000589266 C3orf84H3BNL1 204 aa18.71■□□□□ 0.59
CIRBP-223ENST00000589266 TAGLN2P37802 199 aaKnown RBP18.71■□□□□ 0.59
CIRBP-223ENST00000589266 SNRPD3P62318 126 aaKnown RBP18.71■□□□□ 0.59
CIRBP-223ENST00000589266 AAMDCQ9H7C9 122 aa18.71■□□□□ 0.59
CIRBP-223ENST00000589266 PRELID1Q9Y255 219 aa18.71■□□□□ 0.59
CIRBP-223ENST00000589266 TRAV8-2A0A0B4J237 113 aa18.7■□□□□ 0.58
CIRBP-223ENST00000589266 SLC17A3O00476 420 aa18.7■□□□□ 0.58
CIRBP-223ENST00000589266 IFNA1P01562 189 aa18.7■□□□□ 0.58
CIRBP-223ENST00000589266 TFPI2P48307 235 aa18.7■□□□□ 0.58
CIRBP-223ENST00000589266 CCL20P78556 96 aa18.7■□□□□ 0.58
CIRBP-223ENST00000589266 WFDC3Q8IUB2 231 aa18.7■□□□□ 0.58
CIRBP-223ENST00000589266 MRPL53Q96EL3 112 aaKnown RBP18.7■□□□□ 0.58
CIRBP-223ENST00000589266 OTORQ9NRC9 128 aa18.7■□□□□ 0.58
CIRBP-223ENST00000589266 SORL1Q92673 2214 aa18.69■□□□□ 0.58
CIRBP-223ENST00000589266 A0A1B0GV50 99 aa18.69■□□□□ 0.58
CIRBP-223ENST00000589266 H3BTX0 84 aa18.69■□□□□ 0.58
CIRBP-223ENST00000589266 SNRPCP09234 159 aaKnown RBP18.69■□□□□ 0.58
CIRBP-223ENST00000589266 RANP62826 216 aaKnown RBP18.69■□□□□ 0.58
CIRBP-223ENST00000589266 ARL6IP6Q8N6S5 226 aa18.69■□□□□ 0.58
CIRBP-223ENST00000589266 TENM2Q9NT68 2774 aa18.69■□□□□ 0.58
CIRBP-223ENST00000589266 TXNDC17Q9BRA2 123 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms