RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 OR5R1Q8NH85 324 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 WIPF2Q8TF74 440 aaPredicted RBP7.8□□□□□ -1.16
VPS25-202ENST00000589219 SERTAD4Q9NUC0 356 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 ZNF586Q9NXT0 402 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 MOB4Q9Y3A3 225 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 MXRA5Q9NR99 2828 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 DNHD1Q96M86 4753 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 TRAV34A0A0B4J273 112 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 IGHV1-69DA0A0B4J2H0 117 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 CENPVL3A0A0U1RRI6 287 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 F8W735 103 aaPredicted RBP7.79□□□□□ -1.16
VPS25-202ENST00000589219 K7EQM0 130 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 OR2J3O76001 311 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 IGHV1-69P01742 117 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 EGR2P11161 476 aaPredicted RBP7.79□□□□□ -1.16
VPS25-202ENST00000589219 IER3P46695 156 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 LEMD1Q68G75 181 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 CYB5R2Q6BCY4 276 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 GBGT1Q8N5D6 347 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 ARL6IP6Q8N6S5 226 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 TMEM75Q8N9X5 138 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 OR4B1Q8NGF8 309 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 TSKUQ8WUA8 353 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 TMEM158Q8WZ71 300 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 LINC00479Q96M42 142 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 ATP6V0BQ99437 205 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 MLST8Q9BVC4 326 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 TMEM160Q9NX00 188 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 NAT8BQ9UHF3 227 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 FBXL7Q9UJT9 491 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 RPH3ALQ9UNE2 315 aa7.79□□□□□ -1.16
VPS25-202ENST00000589219 SOX21Q9Y651 276 aaPredicted RBP7.79□□□□□ -1.16
VPS25-202ENST00000589219 A0A096LNT2 108 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 IGHV4-61A0A0C4DH41 118 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 FBLL1A6NHQ2 334 aaKnown RBP7.78□□□□□ -1.16
VPS25-202ENST00000589219 BMPR1BO00238 502 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 MRPS12O15235 138 aaKnown RBP7.78□□□□□ -1.16
VPS25-202ENST00000589219 ATP6V0E1O15342 81 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 ZNF253O75346 499 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 NDUFB8O95169 186 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 ESDP10768 282 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 RPL7P18124 248 aaKnown RBP7.78□□□□□ -1.16
VPS25-202ENST00000589219 RAB9AP51151 201 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 CRIP2P52943 208 aaPredicted RBP7.78□□□□□ -1.16
VPS25-202ENST00000589219 KLF17Q5JT82 389 aaPredicted RBP7.78□□□□□ -1.16
VPS25-202ENST00000589219 FAM120AOSQ5T036 256 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 UNQ5815/PRO19632Q6UWF5 114 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 SIGLEC15Q6ZMC9 328 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 TMEM136Q6ZRR5 245 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 C5orf56Q8N8D9 126 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 NHLRC2Q8NBF2 726 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 NUDT10Q8NFP7 164 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 NUDT11Q96G61 164 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 HSPB9Q9BQS6 159 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 RPP21Q9H633 154 aaKnown RBP7.78□□□□□ -1.16
VPS25-202ENST00000589219 ZNF331Q9NQX6 463 aaPredicted RBP7.78□□□□□ -1.16
VPS25-202ENST00000589219 RABAC1Q9UI14 185 aa7.78□□□□□ -1.16
VPS25-202ENST00000589219 FAM231BA6NCW3 169 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 P01737 135 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 CRISP2P16562 243 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 TCL1AP56279 114 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 PSG9Q00887 426 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 Q0VG73 95 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 JOSD1Q15040 202 aaPredicted RBP7.77□□□□□ -1.17
VPS25-202ENST00000589219 ECSCRQ19T08 205 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 PRR27Q6MZM9 219 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 ZNF502Q8TBZ5 544 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 GFRA4Q9GZZ7 299 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 AAMDCQ9H7C9 122 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 GSN-AS1Q9NRJ2 163 aa7.77□□□□□ -1.17
VPS25-202ENST00000589219 FBN3Q75N90 2809 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 TRAV40A0A0B4J280 105 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 C19orf71A6NCJ1 209 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 A8MWL6 223 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 NPIPB6E9PJ23 425 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 H3BTX0 84 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 RHOGP84095 191 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 OR10J3Q5JRS4 329 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 GOLT1AQ6ZVE7 132 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 EEF1AKMT3Q96AZ1 226 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 DAZAP1Q96EP5 407 aaKnown RBP7.76□□□□□ -1.17
VPS25-202ENST00000589219 ZNF414Q96IQ9 312 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 MEGF9Q9H1U4 602 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 ZFP30Q9Y2G7 519 aa7.76□□□□□ -1.17
VPS25-202ENST00000589219 TRBV7-1A0A0A6YYK4 115 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 OR2T8A6NH00 312 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 FAM223BA6NKX1 122 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 MSMBP08118 114 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 SNRPCP09234 159 aaKnown RBP7.75□□□□□ -1.17
VPS25-202ENST00000589219 IGHV4-31P0DP07 118 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 GATA3P23771 443 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 CSN1S1P47710 185 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 TPPP2P59282 170 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 PAFAH1B2P68402 229 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 C15orf32Q32M92 178 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 MRPL54Q6P161 138 aaKnown RBP7.75□□□□□ -1.17
VPS25-202ENST00000589219 FAM223AQ8IWN6 122 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 EXOC3-AS1Q8N2X6 119 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 NUP35Q8NFH5 326 aa7.75□□□□□ -1.17
VPS25-202ENST00000589219 NEU1Q99519 415 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms