RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 Q86TA4 180 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 TTC9CQ8N5M4 171 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 ZNF491Q8N8L2 437 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 TXN2Q99757 166 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 SPATA25Q9BR10 227 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 C21orf62Q9NYP8 219 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 DMXL2Q8TDJ6 3036 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 A0A1B0GXF2 115 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 WI2-2373I1.2A0A1W2PRP0 233 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 LY6HO94772 140 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 TMEM11P17152 192 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 RPL7P18124 248 aaKnown RBP5.83□□□□□ -1.48
ZNF540-206ENST00000589117 PRR31Q5SQ13 230 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 IGFBPL1Q8WX77 278 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 ALKBH7Q9BT30 221 aaPredicted RBP5.83□□□□□ -1.48
ZNF540-206ENST00000589117 PAM16Q9Y3D7 125 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 IGLV11-55A0A075B6I3 123 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 NPIPB6E9PJ23 425 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 F2Z2F3 143 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 H3BTX0 84 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 M0R2Z0 102 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 HLA-DRB1P01911 266 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 RAB9AP51151 201 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 RIGQ13278 110 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 EBI3Q14213 229 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 PSG3Q16557 428 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 TCF24Q7RTU0 167 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 LHFPL4Q7Z7J7 247 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 EXOC3-AS1Q8N2X6 119 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 CHCHD1Q96BP2 118 aaKnown RBP5.82□□□□□ -1.48
ZNF540-206ENST00000589117 PGLYRP4Q96LB8 373 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 NDFIP1Q9BT67 221 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 LPAR2Q9HBW0 351 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 NAV3Q8IVL0 2385 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.82□□□□□ -1.48
ZNF540-206ENST00000589117 PLA2G1BP04054 148 aaKnown RBP5.82□□□□□ -1.48
ZNF540-206ENST00000589117 IGLC2P0DOY2 106 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 CDKN1AP38936 164 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 EFNA4P52798 201 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 FOXA3P55318 350 aaPredicted RBP5.82□□□□□ -1.48
ZNF540-206ENST00000589117 KLRD1Q13241 179 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 SAPCD1Q5SSQ6 148 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 RNASEKQ6P5S7 137 aaKnown RBP5.82□□□□□ -1.48
ZNF540-206ENST00000589117 CIARTQ8N365 385 aaPredicted RBP5.82□□□□□ -1.48
ZNF540-206ENST00000589117 LINC00482Q8N8I6 264 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 RCHY1Q96PM5 261 aa5.82□□□□□ -1.48
ZNF540-206ENST00000589117 ANKHD1Q8IWZ3 2542 aaKnown RBP5.82□□□□□ -1.48
ZNF540-206ENST00000589117 KALRNO60229 2985 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 PTPRQQ9UMZ3 2332 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 A0A1B0GUT8 65 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 A0A1B0GV90 55 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 A0A1W2PRD5 423 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 A0A1W2PRF3 423 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 A0A1W2PRM7 423 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 C20orf202A1L168 122 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 OR5AL1P0C617 328 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 CD24P25063 80 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 UBE2E1P51965 193 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 LDLRAD2Q5SZI1 272 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 SIGLEC15Q6ZMC9 328 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 ZNF414Q96IQ9 312 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 RABAC1Q9UI14 185 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 PSG8Q9UQ74 426 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 TLN1Q9Y490 2541 aaKnown RBP5.81□□□□□ -1.48
ZNF540-206ENST00000589117 TRAV8-1A0A0A6YYK1 113 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 NDUFB8O95169 186 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 C3orf79P0CE67 100 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 NHLH1Q02575 133 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 NIT1Q86X76 327 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 FAM19A2Q8N3H0 131 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 BSNQ9UPA5 3926 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 SPTBN2O15020 2390 aa5.81□□□□□ -1.48
ZNF540-206ENST00000589117 PLXNB1O43157 2135 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 IGLV2-11P01706 119 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 LINC00614P0C842 121 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 CDSNQ15517 529 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 SPATA45Q537H7 98 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 KLF17Q5JT82 389 aaPredicted RBP5.8□□□□□ -1.48
ZNF540-206ENST00000589117 GDF5OSQ5U4N7 250 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 LINC00322Q6ZN03 302 aaPredicted RBP5.8□□□□□ -1.48
ZNF540-206ENST00000589117 Q8N6K4 173 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 GTSF1Q8WW33 167 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 UQCR10Q9UDW1 63 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 SPTA1P02549 2419 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 CEP295Q9C0D2 2601 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 SMG1Q96Q15 3661 aaKnown RBP5.8□□□□□ -1.48
ZNF540-206ENST00000589117 IGHV2-70DA0A0C4DH43 119 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 FAM181BA6NEQ2 426 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 BMI1P35226 326 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 NUTF2P61970 127 aaKnown RBP5.8□□□□□ -1.48
ZNF540-206ENST00000589117 TMEM70Q9BUB7 260 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 SNHG12Q9BXW3 62 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 UBTD1Q9HAC8 227 aa5.8□□□□□ -1.48
ZNF540-206ENST00000589117 TPRP12270 2363 aaKnown RBP5.79□□□□□ -1.48
ZNF540-206ENST00000589117 LOC102724200A0A096LPH7 203 aaPredicted RBP5.79□□□□□ -1.48
ZNF540-206ENST00000589117 A6NNC1 897 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 GOSR1O95249 250 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 RPS20P60866 119 aaKnown RBP5.79□□□□□ -1.48
ZNF540-206ENST00000589117 TDRG1Q3Y452 100 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 ASPHD1Q5U4P2 390 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms