RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 ZNF580Q9UK33 172 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 EPDR1Q9UM22 224 aa4.27□□□□□ -1.73
CRLF3-204ENST00000583527 A0A087X0K7 114 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 TRAV8-1A0A0A6YYK1 113 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 TRBV7-1A0A0A6YYK4 115 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 IGHV3-35A0A0C4DH35 117 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 TRBV6-1A0A0K0K1D8 114 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 CLPSL1A2RUU4 121 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 C5orf52A6NGY3 159 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 AP4M1O00189 453 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 LTAP01374 205 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 IGHG2P01859 326 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 S100A7P31151 101 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 RPL15P61313 204 aaKnown RBP4.26□□□□□ -1.73
CRLF3-204ENST00000583527 SNRPEP62304 92 aaKnown RBP4.26□□□□□ -1.73
CRLF3-204ENST00000583527 CFHR3Q02985 330 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 FABP9Q0Z7S8 132 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 IBA57Q5T440 356 aaKnown RBP4.26□□□□□ -1.73
CRLF3-204ENST00000583527 HIST2H2BCQ6DN03 193 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 PRR27Q6MZM9 219 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 TOMM20LQ6UXN7 152 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 CLEC19AQ6UXS0 136 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 C9orf139Q6ZV77 190 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 BAGE2Q86Y30 109 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 GBGT1Q8N5D6 347 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 TMEM75Q8N9X5 138 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 OR5R1Q8NH85 324 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 FRZBQ92765 325 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 NOL4LQ96MY1 436 aaPredicted RBP4.26□□□□□ -1.73
CRLF3-204ENST00000583527 MS4A10Q96PG2 267 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 ATP6V0BQ99437 205 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 ZNF492Q9P255 531 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 VPREB3Q9UKI3 123 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 RNF24Q9Y225 148 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 KLF12Q9Y4X4 402 aa4.26□□□□□ -1.73
CRLF3-204ENST00000583527 JMJD1CQ15652 2540 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 PGPA6NDG6 321 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 ZNF705GA8MUZ8 300 aaPredicted RBP4.25□□□□□ -1.73
CRLF3-204ENST00000583527 M0R3E3 92 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 ZNF253O75346 499 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 BRI3O95415 125 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 CA1P00915 261 aaPredicted RBP4.25□□□□□ -1.73
CRLF3-204ENST00000583527 TGFAP01135 160 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 IGLV2-11P01706 119 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 TRBV12-3P01733 135 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 S100A9P06702 114 aaKnown RBP4.25□□□□□ -1.73
CRLF3-204ENST00000583527 TRGC1P0CF51 173 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 SMIM6P0DI80 62 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 PF4V1P10720 104 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 CBLN1P23435 193 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 RELQ04864 619 aaPredicted RBP4.25□□□□□ -1.73
CRLF3-204ENST00000583527 ATP5G2Q06055 141 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 FOXL1Q12952 345 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 SMUG1Q53HV7 270 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 FAM231DQ6ZW35 169 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 OR8I2Q8N0Y5 310 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 LYPD1Q8N2G4 141 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 SGK494Q96LW2 274 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 C17orf77Q96MU5 243 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 GPR82Q96P67 336 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 METTL26Q96S19 204 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 RPP21Q9H633 154 aaKnown RBP4.25□□□□□ -1.73
CRLF3-204ENST00000583527 AAMDCQ9H7C9 122 aa4.25□□□□□ -1.73
CRLF3-204ENST00000583527 SETXQ7Z333 2677 aaKnown RBP4.25□□□□□ -1.73
CRLF3-204ENST00000583527 HIVEP2P31629 2446 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 NF1P21359 2839 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 IGKV2-40A0A087WW87 121 aaPredicted RBP4.24□□□□□ -1.73
CRLF3-204ENST00000583527 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.24□□□□□ -1.73
CRLF3-204ENST00000583527 IGHV3-66A0A0C4DH42 116 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 SERTM2A0A1B0GWG4 89 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 SMIM27A0A1W2PRY6 76 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 IFITM10A6NMD0 228 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 DIRC3C9JPN6 131 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 K7EQM0 130 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 ZNF207O43670 478 aaKnown RBP4.24□□□□□ -1.73
CRLF3-204ENST00000583527 GATCO43716 136 aaKnown RBP4.24□□□□□ -1.73
CRLF3-204ENST00000583527 IGKV2D-40P01614 121 aaPredicted RBP4.24□□□□□ -1.73
CRLF3-204ENST00000583527 IGHV3-11P01762 117 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 MT-ND6P03923 174 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 CLEC3BP05452 202 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 PPIFP30405 207 aaKnown RBP4.24□□□□□ -1.73
CRLF3-204ENST00000583527 ARL3P36405 182 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 RAB9AP51151 201 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 BLCAPP62952 87 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 CT83Q5H943 113 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 MRPL54Q6P161 138 aaKnown RBP4.24□□□□□ -1.73
CRLF3-204ENST00000583527 PRSS57Q6UWY2 283 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 Q6ZS46 218 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 LCNL1Q6ZST4 164 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 PRNTQ86SH4 94 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 HIST3H2BBQ8N257 126 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 Q8TAT8 98 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 ZC2HC1AQ96GY0 325 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 NEU1Q99519 415 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 MLST8Q9BVC4 326 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 ZNF702PQ9H963 129 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 SERTAD4Q9NUC0 356 aa4.24□□□□□ -1.73
CRLF3-204ENST00000583527 WNK1Q9H4A3 2382 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms