RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ACOT7LQ6ZUV0 252 aa5.91□□□□□ -1.46
CASC3-206ENST00000579238 S100A7AQ86SG5 101 aa5.91□□□□□ -1.46
CASC3-206ENST00000579238 CCDC28AQ8IWP9 274 aa5.91□□□□□ -1.46
CASC3-206ENST00000579238 LRRC20Q8TCA0 184 aa5.91□□□□□ -1.46
CASC3-206ENST00000579238 RPUSD4Q96CM3 377 aaKnown RBP5.91□□□□□ -1.46
CASC3-206ENST00000579238 ZNF586Q9NXT0 402 aa5.91□□□□□ -1.46
CASC3-206ENST00000579238 RSL24D1Q9UHA3 163 aaKnown RBP5.91□□□□□ -1.46
CASC3-206ENST00000579238 STRAPQ9Y3F4 350 aaKnown RBP5.91□□□□□ -1.46
CASC3-206ENST00000579238 HERC1Q15751 4861 aa5.91□□□□□ -1.46
CASC3-206ENST00000579238 SMCO3A2RU48 225 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 H3BP45 60 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 RLN2P04090 185 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 OR5G3P0C626 314 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 LINC00869P0C866 280 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 SMIM18P0DKX4 95 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 CXCL2P19875 107 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 HOXA5P20719 270 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 VAMP1P23763 118 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 FAUP35544 74 aaKnown RBP5.9□□□□□ -1.46
CASC3-206ENST00000579238 LINC00315P59091 139 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 SELENOTP62341 195 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 DLK1P80370 383 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 SPCS2Q15005 226 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 TMED4Q7Z7H5 227 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 PGPEP1Q9NXJ5 209 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 PTTG2Q9NZH5 202 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 RNF24Q9Y225 148 aa5.9□□□□□ -1.46
CASC3-206ENST00000579238 GAGE12BA1L429 117 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 SNURFLB1AK76 121 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 MRPS12O15235 138 aaKnown RBP5.89□□□□□ -1.47
CASC3-206ENST00000579238 GAGE7O76087 117 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 GAGE12FP0CL80 117 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 GAGE12GP0CL81 117 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 GAGE12IP0CL82 117 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 INAFM2P0DMQ5 153 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 PRB4P10163 310 aaPredicted RBP5.89□□□□□ -1.47
CASC3-206ENST00000579238 KIR3DS1Q14943 382 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 LCN15Q6UWW0 184 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 Q6ZRN7 208 aaPredicted RBP5.89□□□□□ -1.47
CASC3-206ENST00000579238 SOSTQ9BQB4 213 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 SLC50A1Q9BRV3 221 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 ZNF331Q9NQX6 463 aaPredicted RBP5.89□□□□□ -1.47
CASC3-206ENST00000579238 CCDC59Q9P031 241 aaKnown RBP5.89□□□□□ -1.47
CASC3-206ENST00000579238 FAT1Q14517 4588 aa5.89□□□□□ -1.47
CASC3-206ENST00000579238 PMS2P5A8MQ11 134 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 K7EPK0 472 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 EREGO14944 169 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 SFT2D2O95562 160 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 HOXB5P09067 269 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 ANXA7P20073 488 aaKnown RBP5.88□□□□□ -1.47
CASC3-206ENST00000579238 ID3Q02535 119 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 DAZ2Q13117 558 aaKnown RBP5.88□□□□□ -1.47
CASC3-206ENST00000579238 GFI1BQ5VTD9 330 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 CDPF1Q6NVV7 123 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 PATE2Q6UY27 113 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 CCDC190Q86UF4 302 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 LYPD1Q8N2G4 141 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 DYNC2LI1Q8TCX1 351 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 SLC25A21Q9BQT8 299 aaPredicted RBP5.88□□□□□ -1.47
CASC3-206ENST00000579238 ARL6Q9H0F7 186 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 ARV1Q9H2C2 271 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 PSENENQ9NZ42 101 aa5.88□□□□□ -1.47
CASC3-206ENST00000579238 A0A096LPF7 62 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 FABP12A6NFH5 140 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 FNDC10F2Z333 226 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 SIVA1O15304 175 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 XGP55808 180 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 AP3S2P59780 193 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 ERVFC1-1P60608 527 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 POLR2GP62487 172 aaKnown RBP eCLIP5.87□□□□□ -1.47
CASC3-206ENST00000579238 PPP1R1AQ13522 171 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 C4orf46Q504U0 113 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 PXDC1Q5TGL8 231 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 VSIG2Q96IQ7 327 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 PYGO2Q9BRQ0 406 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 PARD6GQ9BYG4 376 aaPredicted RBP5.87□□□□□ -1.47
CASC3-206ENST00000579238 TMPRSS5Q9H3S3 457 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 NPVFQ9HCQ7 196 aa5.87□□□□□ -1.47
CASC3-206ENST00000579238 TRGV2A0A075B6R0 118 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 TRAV12-3A0A0B4J271 114 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 PRAC2D3DTV9 90 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 TNFSF8P32971 234 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 LEPP41159 167 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 RRAS2P62070 204 aaPredicted RBP5.86□□□□□ -1.47
CASC3-206ENST00000579238 SLC38A11Q08AI6 406 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 TEPPQ6URK8 271 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 Q6ZTI0 123 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 LINC00305Q7Z4B0 112 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 BPIFA4PQ86YQ2 179 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 TOMM5Q8N4H5 51 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 ZBTB8BQ8NAP8 495 aaPredicted RBP5.86□□□□□ -1.47
CASC3-206ENST00000579238 RAB2BQ8WUD1 216 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 FRZBQ92765 325 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 TRIM63Q969Q1 353 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 SMIM8Q96KF7 97 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 C18orf15Q96N68 181 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 ODF3Q96PU9 254 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 MRPS26Q9BYN8 205 aaKnown RBP5.86□□□□□ -1.47
CASC3-206ENST00000579238 PXMP4Q9Y6I8 212 aa5.86□□□□□ -1.47
CASC3-206ENST00000579238 DMBT1Q9UGM3 2413 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms