RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 OR4C13Q8NGP0 309 aa11.44□□□□□ -0.58
SMG6-215ENST00000574501 ARPC1AQ92747 370 aa11.44□□□□□ -0.58
SMG6-215ENST00000574501 TRGV9Q99603 122 aa11.44□□□□□ -0.58
SMG6-215ENST00000574501 SPANXB1Q9NS25 103 aaPredicted RBP11.44□□□□□ -0.58
SMG6-215ENST00000574501 HIGD1AQ9Y241 93 aa11.44□□□□□ -0.58
SMG6-215ENST00000574501 ETDBQ3ZM63 59 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 ATP1A1-AS1Q5TC04 95 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 PHLDA1Q8WV24 401 aaPredicted RBP11.43□□□□□ -0.58
SMG6-215ENST00000574501 CHAC1Q9BUX1 264 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 CUL9Q8IWT3 2517 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 CSMD1Q96PZ7 3565 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 H3BMG7 143 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 CKS1BP61024 79 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 PAX8Q06710 450 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 MRPL51Q4U2R6 128 aaKnown RBP11.43□□□□□ -0.58
SMG6-215ENST00000574501 FAM104BQ5XKR9 115 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 C9orf106Q8NAJ2 232 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 C8orf49Q96NF6 230 aa11.43□□□□□ -0.58
SMG6-215ENST00000574501 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
SMG6-215ENST00000574501 WI2-2373I1.2A0A1W2PRP0 233 aa11.42□□□□□ -0.58
SMG6-215ENST00000574501 IGLV2-23P01705 113 aa11.42□□□□□ -0.58
SMG6-215ENST00000574501 ZNF493Q6ZR52 646 aa11.42□□□□□ -0.58
SMG6-215ENST00000574501 SLC25A39Q9BZJ4 359 aaPredicted RBP11.42□□□□□ -0.58
SMG6-215ENST00000574501 RNF7Q9UBF6 113 aa11.42□□□□□ -0.58
SMG6-215ENST00000574501 PSG8Q9UQ74 426 aa11.42□□□□□ -0.58
SMG6-215ENST00000574501 IGHV3-72A0A0B4J1Y9 119 aa11.41□□□□□ -0.58
SMG6-215ENST00000574501 A0A1B0GW15 77 aa11.41□□□□□ -0.58
SMG6-215ENST00000574501 NPYP01303 97 aa11.41□□□□□ -0.58
SMG6-215ENST00000574501 HOXB4P17483 251 aaPredicted RBP11.41□□□□□ -0.58
SMG6-215ENST00000574501 ATP5G2Q06055 141 aa11.41□□□□□ -0.58
SMG6-215ENST00000574501 AMTNQ6UX39 209 aa11.41□□□□□ -0.58
SMG6-215ENST00000574501 OR10X1Q8NGY0 326 aa11.41□□□□□ -0.58
SMG6-215ENST00000574501 CRYGCP07315 174 aa11.41□□□□□ -0.58
SMG6-215ENST00000574501 INSL3P51460 131 aa11.41□□□□□ -0.58
SMG6-215ENST00000574501 SPRY4Q9C004 299 aa11.41□□□□□ -0.58
SMG6-215ENST00000574501 U3KQK5 164 aa11.41□□□□□ -0.58
SMG6-215ENST00000574501 A0A1W2PRD5 423 aa11.4□□□□□ -0.58
SMG6-215ENST00000574501 A0A1W2PRF3 423 aa11.4□□□□□ -0.58
SMG6-215ENST00000574501 A0A1W2PRM7 423 aa11.4□□□□□ -0.58
SMG6-215ENST00000574501 M0R1B8 84 aa11.4□□□□□ -0.58
SMG6-215ENST00000574501 ENSAO43768 121 aaKnown RBP11.4□□□□□ -0.58
SMG6-215ENST00000574501 CKS2P33552 79 aa11.4□□□□□ -0.58
SMG6-215ENST00000574501 LINC00574Q9H8X3 128 aa11.4□□□□□ -0.58
SMG6-215ENST00000574501 TRBV25-1A0A075B6N4 114 aa11.4□□□□□ -0.58
SMG6-215ENST00000574501 C16orf97H3BN30 126 aa11.4□□□□□ -0.58
SMG6-215ENST00000574501 FOXI2Q6ZQN5 318 aa11.4□□□□□ -0.58
SMG6-215ENST00000574501 GTSCR1Q86UQ5 136 aa11.4□□□□□ -0.58
SMG6-215ENST00000574501 TRAV26-1A0A087WT03 109 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 F8W1H4 67 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 J3QR89 54 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 M0R3E3 92 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 TM4SF5O14894 197 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 SCGB2A2Q13296 93 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 SPATA25Q9BR10 227 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 TMEM133Q9H2Q1 129 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 HHLA3Q9XRX5 114 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 A0A1W2PNU3 283 aaPredicted RBP11.39□□□□□ -0.59
SMG6-215ENST00000574501 PRR33A8MZF0 331 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 IGLL5B9A064 214 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 MRGPRG-AS1Q2M3A8 158 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 ZNF562Q6V9R5 426 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 CEND1Q8N111 149 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 TMEM75Q8N9X5 138 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 C1orf162Q8NEQ5 155 aaPredicted RBP11.39□□□□□ -0.59
SMG6-215ENST00000574501 TACC2O95359 2948 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 PLCE1Q9P212 2302 aa11.39□□□□□ -0.59
SMG6-215ENST00000574501 ZNF71Q9NQZ8 489 aaPredicted RBP11.38□□□□□ -0.59
SMG6-215ENST00000574501 E9PLD3 99 aa11.38□□□□□ -0.59
SMG6-215ENST00000574501 RBP4P02753 201 aa11.38□□□□□ -0.59
SMG6-215ENST00000574501 PRSS1P07477 247 aa11.38□□□□□ -0.59
SMG6-215ENST00000574501 CT45A10P0DMU9 189 aa11.38□□□□□ -0.59
SMG6-215ENST00000574501 TNFAIP6P98066 277 aaPredicted RBP11.38□□□□□ -0.59
SMG6-215ENST00000574501 Q6AWC8 147 aa11.38□□□□□ -0.59
SMG6-215ENST00000574501 ZNF479Q96JC4 524 aa11.38□□□□□ -0.59
SMG6-215ENST00000574501 HIGD1BQ9P298 99 aa11.38□□□□□ -0.59
SMG6-215ENST00000574501 TRBV19A0A075B6N1 114 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 TMEM238LA0A1B0GVL6 79 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 GAS8-AS1O95177 125 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 CNTFRP26992 372 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 ODF1Q14990 250 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 TWIST1Q15672 202 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 VMA21Q3ZAQ7 101 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 LINC00312Q9Y6C7 94 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 LEPP41159 167 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 CRYBA4P53673 196 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 LPAL2Q16609 132 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 TMEM14CQ9P0S9 112 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 SH3BGRL2Q9UJC5 107 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 SLC25A15Q9Y619 301 aa11.37□□□□□ -0.59
SMG6-215ENST00000574501 K7EQM0 130 aa11.36□□□□□ -0.59
SMG6-215ENST00000574501 SIGLEC15Q6ZMC9 328 aa11.36□□□□□ -0.59
SMG6-215ENST00000574501 NGBQ9NPG2 151 aa11.36□□□□□ -0.59
SMG6-215ENST00000574501 TRBV6-1A0A0K0K1D8 114 aa11.36□□□□□ -0.59
SMG6-215ENST00000574501 ZC2HC1BQ5TFG8 222 aa11.36□□□□□ -0.59
SMG6-215ENST00000574501 TM2D2Q9BX73 214 aa11.36□□□□□ -0.59
SMG6-215ENST00000574501 CACNA1HO95180 2353 aa11.36□□□□□ -0.59
SMG6-215ENST00000574501 AGRNO00468 2067 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 NPIPB5A8MRT5 1133 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 SH2D1AO60880 128 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 IGHV1-46P01743 117 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms