RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 C10orf55Q5SWW7 151 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 A0A1W2PPI3 338 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 IGHV3-23P01764 117 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 RPL36AP83881 106 aaKnown RBP10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 KRTAP27-1Q3LI81 207 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 LY6G5BQ8NDX9 201 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 RPL36ALQ969Q0 106 aaKnown RBP10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 C1QTNF4Q9BXJ3 329 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 CRIM1Q9NZV1 1036 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 METRNQ9UJH8 293 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 C15orf65H3BRN8 121 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 TRPT1Q86TN4 253 aaKnown RBP10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 STHQ8IWL8 128 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 TMEM158Q8WZ71 300 aa10.02□□□□□ -0.81
PCDHGA9-201ENST00000573521 IGHV3OR16-13A0A075B7E8 117 aa10.01□□□□□ -0.81
PCDHGA9-201ENST00000573521 IGHV3-74A0A0B4J1X5 117 aa10.01□□□□□ -0.81
PCDHGA9-201ENST00000573521 TNFRSF6BO95407 300 aa10.01□□□□□ -0.81
PCDHGA9-201ENST00000573521 PRDM6Q9NQX0 595 aa10.01□□□□□ -0.81
PCDHGA9-201ENST00000573521 EREGO14944 169 aa10.01□□□□□ -0.81
PCDHGA9-201ENST00000573521 TRAV2A0A0B4J234 112 aa10.01□□□□□ -0.81
PCDHGA9-201ENST00000573521 C20orf78Q9BR46 151 aa10.01□□□□□ -0.81
PCDHGA9-201ENST00000573521 BPTFQ12830 3046 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 IGKV2-40A0A087WW87 121 aaPredicted RBP10□□□□□ -0.81
PCDHGA9-201ENST00000573521 IGKV2D-40P01614 121 aaPredicted RBP10□□□□□ -0.81
PCDHGA9-201ENST00000573521 SLC25A16P16260 332 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 RSPO1Q2MKA7 263 aaPredicted RBP10□□□□□ -0.81
PCDHGA9-201ENST00000573521 OCIAD2Q56VL3 154 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 IGHV3OR16-12A0A075B7B8 117 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 hDV102S1A0JD36 115 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 INAFM2P0DMQ5 153 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 C1orf122Q6ZSJ8 110 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 GTSCR1Q86UQ5 136 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 PSMB11A5LHX3 300 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 AMN1Q8IY45 258 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 PROK2Q9HC23 129 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 TMEM8BA6NDV4 472 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 H3BRN7 92 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 PF4P02776 101 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 PRADC1Q9BSG0 188 aa10□□□□□ -0.81
PCDHGA9-201ENST00000573521 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 MUC21A0A0G2JKD1 596 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 MUC21A0A140T8X8 626 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 C22orf46C9J442 243 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 INS-IGF2F8WCM5 200 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 H3BUA1 57 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 MUC21Q5SSG8 566 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 MDC1Q14676 2089 aaKnown RBP9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 IGHV3-49A0A0A0MS15 119 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 A6NNC1 897 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 B4DSR2 109 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 UBE2E1P51965 193 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 RPL15P61313 204 aaKnown RBP9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 CD300EQ496F6 205 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 IGHV3-66A0A0C4DH42 116 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 RBAKDNA6NC62 111 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 Q6ZWC4 215 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 ITLN2Q8WWU7 325 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 CST9LQ9H4G1 147 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 ABCA7Q8IZY2 2146 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 DNAJC13O75165 2243 aa9.99□□□□□ -0.81
PCDHGA9-201ENST00000573521 A0A087X0K7 114 aa9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 ADARB2-AS1A8MUL3 147 aa9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 CEACAM8P31997 349 aaPredicted RBP9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 DAZ1Q9NQZ3 744 aaKnown RBP9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 S4R3C0 116 aa9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 TCF20Q9UGU0 1960 aaKnown RBP9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 LSM4Q9Y4Z0 139 aaKnown RBP9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 LRRK1Q38SD2 2015 aa9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 EVI2AP22794 236 aa9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 PPDPFLQ8WWR9 84 aa9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 K7EP34 96 aa9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 CRPP02741 224 aa9.98□□□□□ -0.81
PCDHGA9-201ENST00000573521 ARMS2P0C7Q2 107 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 HAPLN4Q86UW8 402 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 ZNF114Q8NC26 417 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 ATP6V0BQ99437 205 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 SELLP14151 372 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 C17orf58Q2M2W7 97 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 CSTL1Q9H114 145 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 FRMPD3Q5JV73 1810 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 IGKV1-16P04430 117 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 WIPF3A6NGB9 483 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 IGKV3-20P01619 116 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 PMVKQ15126 192 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 PRR25Q96S07 402 aa9.97□□□□□ -0.81
PCDHGA9-201ENST00000573521 TP53BP1Q12888 1972 aaPredicted RBP9.96□□□□□ -0.81
PCDHGA9-201ENST00000573521 LTAP01374 205 aa9.96□□□□□ -0.81
PCDHGA9-201ENST00000573521 C2orf82Q6UX34 121 aa9.96□□□□□ -0.81
PCDHGA9-201ENST00000573521 SPACA3Q8IXA5 215 aa9.96□□□□□ -0.81
PCDHGA9-201ENST00000573521 ZNF876PQ49A33 203 aa9.96□□□□□ -0.81
PCDHGA9-201ENST00000573521 RCHY1Q96PM5 261 aa9.96□□□□□ -0.81
PCDHGA9-201ENST00000573521 TANC1Q9C0D5 1861 aa9.96□□□□□ -0.82
PCDHGA9-201ENST00000573521 SDK2Q58EX2 2172 aa9.96□□□□□ -0.82
PCDHGA9-201ENST00000573521 SRRM4A7MD48 611 aaKnown RBP9.96□□□□□ -0.82
PCDHGA9-201ENST00000573521 SLAQ13239 276 aa9.96□□□□□ -0.82
PCDHGA9-201ENST00000573521 TIMM21Q9BVV7 248 aa9.96□□□□□ -0.82
PCDHGA9-201ENST00000573521 C11orf68Q9H3H3 251 aaKnown RBP9.96□□□□□ -0.82
PCDHGA9-201ENST00000573521 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.82
PCDHGA9-201ENST00000573521 ZNF581Q9P0T4 197 aa9.96□□□□□ -0.82
PCDHGA9-201ENST00000573521 NCR2O95944 276 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms