RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 DAZ1Q9NQZ3 744 aaKnown RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 DAZ3Q9NR90 486 aaKnown RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 RPRMQ9NS64 109 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 CBLN4Q9NTU7 201 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 BET1LQ9NYM9 111 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 ZNF256Q9Y2P7 627 aaPredicted RBP2.79□□□□□ -1.96
SMG6-208ENST00000570874 ROS1P08922 2347 aa2.79□□□□□ -1.96
SMG6-208ENST00000570874 PKD1L2Q7Z442 2459 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 TRBV19A0A075B6N1 114 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 IGHV3OR15-7A0A075B7D8 119 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 A0A087WWC5 75 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 TRAV8-6A0A0B4J262 113 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 TRAV4A0A0B4J268 109 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 IGHV3OR16-9A0A0B4J2B5 98 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 TRGV8A0A0C4DH27 118 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 A0A1B0GXF2 115 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 WI2-2373I1.2A0A1W2PRP0 233 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 hDV102S1A0JD36 115 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 DPRXA6NFQ7 191 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 C8orf87E5RJ46 101 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 FNDC10F2Z333 226 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 UPK2O00526 184 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 NDUFB8O95169 186 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 CA2P00918 260 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 CTSDP07339 412 aaPredicted RBP2.78□□□□□ -1.96
SMG6-208ENST00000570874 FCGR3AP08637 254 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 RBMY1CP0DJD4 496 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 ZNF728P0DKX0 622 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 P0DMU3 169 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 FAM231AP0DMU4 169 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 FAM231CP0DMU5 169 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 PSMB2P49721 201 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 RND2P52198 227 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 FGF12P61328 243 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 PAX8Q06710 450 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 NSUN5P1Q3KNT7 163 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 CENPWQ5EE01 88 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 Q5XG85 94 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 AMMECR1LQ6DCA0 310 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 Q6P435 159 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 Q6Q795 121 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 Q6ZRU5 148 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 LHFPL1Q86WI0 220 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 TEX29Q8N6K0 151 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 LY6G5BQ8NDX9 201 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 OR5H2Q8NGV7 314 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 RNF126Q9BV68 326 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 RTL8AQ9BWD3 113 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 SFXN3Q9BWM7 321 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 COMMD5Q9GZQ3 224 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 EIF5A2Q9GZV4 153 aaKnown RBP2.78□□□□□ -1.96
SMG6-208ENST00000570874 SLC35B3Q9H1N7 401 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 CYTL1Q9NRR1 136 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 TMEM242Q9NWH2 141 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 INSIG2Q9Y5U4 225 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 SPTBN4Q9H254 2564 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 CR1P17927 2039 aa2.78□□□□□ -1.96
SMG6-208ENST00000570874 DSPP15924 2871 aaKnown RBP2.78□□□□□ -1.97
SMG6-208ENST00000570874 LOC107984640A0A0U1RRK4 108 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 C7orf71A4D174 169 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 H7BYZ3 331 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 J3QQQ9 107 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 NDUFS5O43920 106 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 DEDDO75618 318 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 SPINK8P0C7L1 97 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 SFTA3P0C7M3 94 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 GZMBP10144 247 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 GNLYP22749 145 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 SNCAP37840 140 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 CA7P43166 264 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 FXYD4P59646 89 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 BSPH1Q075Z2 132 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 ZNF718Q3SXZ3 478 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 AADACL3Q5VUY0 350 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 CLEC19AQ6UXS0 136 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 MKXQ8IYA7 352 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 SAXO1Q8IYX7 474 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 ZCCHC24Q8N2G6 241 aaKnown RBP2.77□□□□□ -1.97
SMG6-208ENST00000570874 CD177Q8N6Q3 437 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 RFESDQ8TAC1 157 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 LINC01560Q8TB33 94 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 MRPL30Q8TCC3 161 aaKnown RBP2.77□□□□□ -1.97
SMG6-208ENST00000570874 LRRC29Q8WV35 223 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 ITLN1Q8WWA0 313 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 RBMXL1Q96E39 390 aaKnown RBP2.77□□□□□ -1.97
SMG6-208ENST00000570874 GNPNAT1Q96EK6 184 aaPredicted RBP2.77□□□□□ -1.97
SMG6-208ENST00000570874 C2orf48Q96LS8 159 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 SPIN2AQ99865 258 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 SPIN2BQ9BPZ2 258 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 MRPL20Q9BYC9 149 aaKnown RBP2.77□□□□□ -1.97
SMG6-208ENST00000570874 IMUPQ9GZP8 106 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 PARP12Q9H0J9 701 aaKnown RBP2.77□□□□□ -1.97
SMG6-208ENST00000570874 C7orf69Q9H7B7 122 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 EDA2RQ9HAV5 297 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 CACFD1Q9UGQ2 172 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 RPUSD1Q9UJJ7 312 aaKnown RBP2.77□□□□□ -1.97
SMG6-208ENST00000570874 OR2W1Q9Y3N9 320 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 MPC1Q9Y5U8 109 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 PXMP4Q9Y6I8 212 aa2.77□□□□□ -1.97
SMG6-208ENST00000570874 WNK2Q9Y3S1 2297 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms