RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 OR2T35Q8NGX2 323 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 TMEM254Q8TBM7 123 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 PYDC1Q8WXC3 89 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 LZICQ8WZA0 190 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 DGCR14Q96DF8 476 aaKnown RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 MCEEQ96PE7 176 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 SLC25A21Q9BQT8 299 aaPredicted RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 MAP1LC3BQ9GZQ8 125 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 POPDC3Q9HBV1 291 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 BATF3Q9NR55 127 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 MED11Q9P086 117 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 RNF11Q9Y3C5 154 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 ASB4Q9Y574 426 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 PEAK1Q9H792 1746 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 LAMB4A4D0S4 1761 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 NUP210LQ5VU65 1888 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 CEP164Q9UPV0 1460 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 MYO18AQ92614 2054 aaKnown RBP0.53□□□□□ -2.32
CHD9-211ENST00000564600 TRAV27A0A087WT01 109 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 TRBV6-8A0A0A6YYG3 113 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 PIGBOS1A0A0B4J2F0 54 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 TRBV6-4A0A1B0GX49 114 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 TCRBV4S1A1TA0A5B7 111 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 A6NN06 94 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 C5orf58C9J3I9 102 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 TSTD3H0UI37 97 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 J3QR89 54 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 TMEM256-PLSCR3K7ERE1 68 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 MFSD11O43934 449 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 CST7O76096 145 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 GADD45GO95257 159 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 TRGC2P03986 189 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 CRHP06850 196 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 DBIP07108 87 aaKnown RBP0.53□□□□□ -2.32
CHD9-211ENST00000564600 IDO1P14902 403 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 S100GP29377 79 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 MRPS36P82909 103 aaKnown RBP0.53□□□□□ -2.32
CHD9-211ENST00000564600 SURF2Q15527 256 aaPredicted RBP0.53□□□□□ -2.32
CHD9-211ENST00000564600 SNCBQ16143 134 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 TMEM78Q5T7P6 136 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 TEN1Q86WV5 123 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 PRR15Q8IV56 129 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 OR4B1Q8NGF8 309 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 OR9Q1Q8NGQ5 310 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 OR4K15Q8NH41 348 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 CDC26Q8NHZ8 85 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 PPP1R1CQ8WVI7 109 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 LINC00052Q96N35 136 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 AP1S3Q96PC3 154 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 VPS25Q9BRG1 176 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 LXNQ9BS40 222 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 OR2J1Q9GZK6 312 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 MED29Q9NX70 200 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 HSPB8Q9UJY1 196 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 RTL9Q8NET4 1388 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 KIAA1107Q9UPP5 1409 aa0.53□□□□□ -2.32
CHD9-211ENST00000564600 CECR2Q9BXF3 1484 aa0.53□□□□□ -2.33
CHD9-211ENST00000564600 COL24A1Q17RW2 1714 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 SIP14410 1827 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 NCOA6Q14686 2063 aaPredicted RBP0.52□□□□□ -2.33
CHD9-211ENST00000564600 ABCA2Q9BZC7 2435 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.52□□□□□ -2.33
CHD9-211ENST00000564600 IGHV1-58A0A0C4DH39 117 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 C1orf196B1AJZ1 125 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 YPEL1O60688 119 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 BANF1O75531 89 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 IFNA21P01568 189 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 APOC1P02654 83 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 CSN2P05814 226 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 NFYBP25208 207 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 SERPINB1P30740 379 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 RAB5CP51148 216 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 CRYBA4P53673 196 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 FXYD6P3P58550 94 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 GNG5P63218 68 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 TFAMQ00059 246 aaKnown RBP0.52□□□□□ -2.33
CHD9-211ENST00000564600 PRB3Q04118 309 aaPredicted RBP0.52□□□□□ -2.33
CHD9-211ENST00000564600 C4orf22Q6V702 233 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 S100A7AQ86SG5 101 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 ANGPTL5Q86XS5 388 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 CTAGE3PQ8IX95 158 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 OR5AS1Q8N127 324 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 MMGT1Q8N4V1 131 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 C5orf17Q8NAS9 161 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 TMEM35BQ8NCS4 154 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 ST6GALNAC3Q8NDV1 305 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 OR10AC1Q8NH08 325 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 OR10AG1Q8NH19 301 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 PSMF1Q92530 271 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 NPCDR1Q9BY65 106 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 GID8Q9NWU2 228 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 CALML5Q9NZT1 146 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 GSKIPQ9P0R6 139 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 TMEM14CQ9P0S9 112 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 OR52A1Q9UKL2 312 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 ZFP30Q9Y2G7 519 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 NUBP2Q9Y5Y2 271 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 TRAPPC8Q9Y2L5 1435 aa0.52□□□□□ -2.33
CHD9-211ENST00000564600 SPTBN4Q9H254 2564 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 KIAA1109Q2LD37 5005 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms