RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 NCKAP5O14513 1909 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 AKAP11Q9UKA4 1901 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 A0A087X0T9 212 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 TRGV5A0A0B4J1U4 118 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 TRAV4A0A0B4J268 109 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 TRGV4A0A0C4DH28 118 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 LOC107984640A0A0U1RRK4 108 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 LOC100130705A0A1B0GUX0 176 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 TRDV1A0A1B0GX56 115 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 GABARAPH6UMI1 98 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 H7BYZ3 331 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 J3QQQ9 107 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 PDCD5O14737 125 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 OR2T1O43869 369 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 CREBL2O60519 120 aaPredicted RBP1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 CST7O76096 145 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 MPC2O95563 127 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 PMP2P02689 132 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 P0DMU3 169 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 FAM231AP0DMU4 169 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 FAM231CP0DMU5 169 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 FABP2P12104 132 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 IFITM1P13164 125 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 NFYBP25208 207 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 ERHP84090 104 aaKnown RBP1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 CATR1Q13166 79 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 PEA15Q15121 130 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 MIAQ16674 131 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 FAM74A1Q5RGS3 127 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 AADACL3Q5VUY0 350 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 Q6ZS49 121 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 LINC00305Q7Z4B0 112 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 TRAPPC6BQ86SZ2 158 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 KCNRGQ8N5I3 272 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 TTC9CQ8N5M4 171 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 OR2T10Q8NGZ9 312 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 COPS9Q8WXC6 57 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 RAB37Q96AX2 223 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 MRPS24Q96EL2 167 aaKnown RBP1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 C2orf50Q96LR7 162 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 HYLS1Q96M11 299 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 CIB3Q96Q77 187 aaPredicted RBP1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 ATG5Q9H1Y0 275 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 BANF2Q9H503 90 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 SMCO4Q9NRQ5 59 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 FBXL12Q9NXK8 326 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 AMMECR1Q9Y4X0 333 aaPredicted RBP1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 TIMM9Q9Y5J7 89 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 IER3IP1Q9Y5U9 82 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 ZNF106Q9H2Y7 1883 aaKnown RBP1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 PHLPP1O60346 1717 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 KDM5AP29375 1690 aaKnown RBP1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 ARHGEF11O15085 1522 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 ZFYVE16Q7Z3T8 1539 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 PTPRBP23467 1997 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 ADGRL2O95490 1459 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 MYOM2P54296 1465 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 GRIN2AQ12879 1464 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 MYH7P12883 1935 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 ARHGAP31Q2M1Z3 1444 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 CPAMD8Q8IZJ3 1885 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 ROBO3Q96MS0 1386 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 COL5A1P20908 1838 aaPredicted RBP1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 XIRP1Q702N8 1843 aaKnown RBP1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 BCORL1Q5H9F3 1711 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 A0A0G2JQZ4 141 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 A0A0J9YW62 118 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 SPAARA0A1B0GVQ0 90 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 A0A1W2PRS3 328 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 IRGMA1A4Y4 181 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 TLCD2A6NGC4 264 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 A8MWV9 139 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 RER1O15258 196 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 KLF7O75840 302 aaPredicted RBP1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 TNFP01375 233 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 TRGC2P03986 189 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 PRM2P04554 102 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 CTSDP07339 412 aaPredicted RBP1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 SMIM10L2AP0DMW4 78 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 SMIM10L2BP0DMW5 78 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 CCL5P13501 91 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 AQP4P55087 323 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 ARPP19P56211 112 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 AKR1C1Q04828 323 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 SS18Q15532 418 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 KISS1Q15726 138 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 MRPL54Q6P161 138 aaKnown RBP1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 TMEM14EPQ6UXP3 125 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 PRR15Q8IV56 129 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 C10orf126Q8N4M7 172 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 OR5D16Q8NGK9 328 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 BRK1Q8WUW1 75 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 CARD19Q96LW7 228 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 GPX7Q96SL4 187 aaPredicted RBP1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 NAA38Q9BRA0 125 aaKnown RBP1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 SNRNP25Q9BV90 132 aaKnown RBP1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 MRPL32Q9BYC8 188 aaKnown RBP1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 TMEM133Q9H2Q1 129 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 NAA60Q9H7X0 242 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms