RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 BRD3OSQ6XYD6 125 aa3.93□□□□□ -1.78
CHD9-205ENST00000562785 ZNF709Q8N972 641 aa3.93□□□□□ -1.78
CHD9-205ENST00000562785 ZNF680Q8NEM1 530 aa3.93□□□□□ -1.78
CHD9-205ENST00000562785 WFDC11Q8NEX6 87 aa3.93□□□□□ -1.78
CHD9-205ENST00000562785 SLC35E1Q96K37 410 aa3.93□□□□□ -1.78
CHD9-205ENST00000562785 OR4C12Q96R67 309 aa3.93□□□□□ -1.78
CHD9-205ENST00000562785 GINS3Q9BRX5 216 aa3.93□□□□□ -1.78
CHD9-205ENST00000562785 PSMG3Q9BT73 122 aaPredicted RBP3.93□□□□□ -1.78
CHD9-205ENST00000562785 SMIM3Q9BZL3 60 aa3.93□□□□□ -1.78
CHD9-205ENST00000562785 FBXL15Q9H469 300 aa3.93□□□□□ -1.78
CHD9-205ENST00000562785 TIMM9Q9Y5J7 89 aa3.93□□□□□ -1.78
CHD9-205ENST00000562785 TRAV3A0A0B4J244 114 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 IGLC7A0M8Q6 106 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 SMCO3A2RU48 225 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 TEX46H3BTG2 121 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 H3BUX3 64 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 MBP02144 154 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 DEFA4P12838 97 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 HIST1H1BP16401 226 aaKnown RBP3.92□□□□□ -1.78
CHD9-205ENST00000562785 GPX4P36969 197 aaPredicted RBP3.92□□□□□ -1.78
CHD9-205ENST00000562785 OPRK1P41145 380 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 RAB2AP61019 212 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 SERF2P84101 59 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 FXYD3Q14802 87 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 SPINK9Q5DT21 86 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 CLLU1Q5K131 121 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 LDLRAD2Q5SZI1 272 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 AKR1C8PQ5T2L2 129 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 RPL7L1Q6DKI1 246 aaKnown RBP3.92□□□□□ -1.78
CHD9-205ENST00000562785 ALKAL2Q6UX46 152 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 SPNS3Q6ZMD2 512 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 SLC16A13Q7RTY0 426 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 DYNAPQ8N1N2 210 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 HSD17B11Q8NBQ5 300 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 OR2G3Q8NGZ4 309 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 OR1P1Q8NH06 330 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 CACNG8Q8WXS5 425 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 RBM14Q96PK6 669 aaKnown RBP3.92□□□□□ -1.78
CHD9-205ENST00000562785 ARV1Q9H2C2 271 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 F11RQ9Y624 299 aaKnown RBP3.92□□□□□ -1.78
CHD9-205ENST00000562785 KIAA2026Q5HYC2 2103 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 ROS1P08922 2347 aa3.92□□□□□ -1.78
CHD9-205ENST00000562785 TENM4Q6N022 2769 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 H3BUA1 57 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 IGHV3-48P01763 117 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 PRH1P02810 166 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 OPN1MWP04001 364 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 OPN1MW2P0DN77 364 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 OPN1MW3P0DN78 364 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 OR13C7P0DN81 318 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 RNASE2P10153 161 aaKnown RBP3.91□□□□□ -1.78
CHD9-205ENST00000562785 FGF7P21781 194 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 CNTFRP26992 372 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 SRP14P37108 136 aaKnown RBP3.91□□□□□ -1.78
CHD9-205ENST00000562785 IFITM2Q01629 132 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 WT1-ASQ06250 92 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 KLF17Q5JT82 389 aaPredicted RBP3.91□□□□□ -1.78
CHD9-205ENST00000562785 C10orf55Q5SWW7 151 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 S100A7AQ86SG5 101 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 TMEM86BQ8N661 226 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 C5orf56Q8N8D9 126 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 Q8N9W7 124 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 LFNGQ8NES3 379 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 SGMS2Q8NHU3 365 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 C17orf50Q8WW18 174 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 P2RX4Q99571 388 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 COL12A1Q99715 3063 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 NPCDR1Q9BY65 106 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 WDR61Q9GZS3 305 aaKnown RBP3.91□□□□□ -1.78
CHD9-205ENST00000562785 PARP11Q9NR21 331 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 CYTL1Q9NRR1 136 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 VPREB3Q9UKI3 123 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 USP9YO00507 2555 aaPredicted RBP3.91□□□□□ -1.78
CHD9-205ENST00000562785 ICE1Q9Y2F5 2266 aa3.91□□□□□ -1.78
CHD9-205ENST00000562785 YLPM1P49750 1951 aaKnown RBP3.91□□□□□ -1.78
CHD9-205ENST00000562785 ANKRD17O75179 2603 aaKnown RBP3.91□□□□□ -1.78
CHD9-205ENST00000562785 MALRD1Q5VYJ5 2156 aa3.9□□□□□ -1.78
CHD9-205ENST00000562785 A6NDX4 124 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 KLLNB2CW77 178 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 MT-CO2P00403 227 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 HBE1P02100 147 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 CRYGCP07315 174 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 CD24P25063 80 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 ATP6V0CP27449 155 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 S100A7P31151 101 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 SULT1A2P50226 295 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 SELENOTP62341 195 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 NDPQ00604 133 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 ACOT6Q3I5F7 207 aaPredicted RBP3.9□□□□□ -1.79
CHD9-205ENST00000562785 TMEM144Q7Z5S9 345 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 SLC35E3Q7Z769 313 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 COMMD1Q8N668 190 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 OR10W1Q8NGF6 305 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 C16orf74Q96GX8 76 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 NPVFQ9HCQ7 196 aa3.9□□□□□ -1.79
CHD9-205ENST00000562785 SPTAN1Q13813 2472 aaKnown RBP3.9□□□□□ -1.79
CHD9-205ENST00000562785 CR1P17927 2039 aa3.89□□□□□ -1.79
CHD9-205ENST00000562785 USF3Q68DE3 2245 aa3.89□□□□□ -1.79
CHD9-205ENST00000562785 ABCA2Q9BZC7 2435 aa3.89□□□□□ -1.79
CHD9-205ENST00000562785 TRAV30A0A087WSZ9 112 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms