RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 C1orf174Q8IYL3 243 aa2.85□□□□□ -1.95
LRRC28-205ENST00000558248 EXOC3-AS1Q8N2X6 119 aa2.85□□□□□ -1.95
LRRC28-205ENST00000558248 ZNF721Q8TF20 911 aa2.85□□□□□ -1.95
LRRC28-205ENST00000558248 ZNF414Q96IQ9 312 aa2.85□□□□□ -1.95
LRRC28-205ENST00000558248 GGACTQ9BVM4 153 aa2.85□□□□□ -1.95
LRRC28-205ENST00000558248 NKX6-2Q9C056 277 aaPredicted RBP2.85□□□□□ -1.95
LRRC28-205ENST00000558248 POPDC3Q9HBV1 291 aa2.85□□□□□ -1.95
LRRC28-205ENST00000558248 U3KQ87 197 aa2.85□□□□□ -1.95
LRRC28-205ENST00000558248 PRKDCP78527 4128 aaKnown RBP2.85□□□□□ -1.95
LRRC28-205ENST00000558248 MED12LQ86YW9 2145 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 IGHV3OR15-7A0A075B7D8 119 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 IGHV3-49A0A0A0MS15 119 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 LOC285095A0A1B0GVY8 99 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 OR5H14A6NHG9 310 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 A8MUN3 132 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 CLDN25C9JDP6 229 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 COX7A2LO14548 114 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 BPY2O14599 106 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 TRAF3IP2O43734 574 aaPredicted RBP2.84□□□□□ -1.95
LRRC28-205ENST00000558248 CCL3P10147 92 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 SLC25A16P16260 332 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 RPL7P18124 248 aaKnown RBP2.84□□□□□ -1.95
LRRC28-205ENST00000558248 IL1RNP18510 177 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 EVI2AP22794 236 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 NPY1RP25929 384 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 S100A2P29034 98 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 POLR2HP52434 150 aaKnown RBP2.84□□□□□ -1.95
LRRC28-205ENST00000558248 KLF3P57682 345 aaPredicted RBP2.84□□□□□ -1.95
LRRC28-205ENST00000558248 HBA1P69905 142 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 BTG2P78543 158 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 MORN2Q502X0 79 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 LYRM7Q5U5X0 104 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 UNQ9165/PRO28630Q6UXU0 137 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 C3orf62Q6ZUJ4 267 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 SUMF2Q8NBJ7 301 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 APCDD1LQ8NCL9 501 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 RAB2BQ8WUD1 216 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 TOMM6Q96B49 74 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 IGF2BP2-AS1Q96M15 143 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 OR2H1Q9GZK4 316 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 WDR61Q9GZS3 305 aaKnown RBP2.84□□□□□ -1.95
LRRC28-205ENST00000558248 C8orf17Q9NRJ1 99 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 TMEM38BQ9NVV0 291 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 CYSLTR1Q9Y271 337 aa2.84□□□□□ -1.95
LRRC28-205ENST00000558248 HEATR5BQ9P2D3 2071 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 IGLV3-16A0A075B6K0 115 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF860A6NHJ4 632 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 K7ERU9 68 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 M0R2Z0 102 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 LST1O00453 97 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 CCL22O00626 93 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 TXNDC9O14530 226 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 BANF1O75531 89 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 CD7P09564 240 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 SCTP09683 121 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 BCL2P10415 239 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 RPS3P23396 243 aaKnown RBP eCLIP2.83□□□□□ -1.96
LRRC28-205ENST00000558248 CD200P41217 278 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 RAB13P51153 203 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 DAPP51397 102 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 DEFA3P59666 94 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 RRAS2P62070 204 aaPredicted RBP2.83□□□□□ -1.96
LRRC28-205ENST00000558248 EMX2Q04743 252 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 ENDOGQ14249 297 aaKnown RBP2.83□□□□□ -1.96
LRRC28-205ENST00000558248 CCSMST1Q4G0I0 132 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 RNASE13Q5GAN3 156 aaKnown RBP2.83□□□□□ -1.96
LRRC28-205ENST00000558248 NCBP2-AS2Q69YL0 99 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 PRSS54Q6PEW0 395 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 MORN3Q6PF18 240 aaPredicted RBP2.83□□□□□ -1.96
LRRC28-205ENST00000558248 HAGHLQ6PII5 290 aaPredicted RBP2.83□□□□□ -1.96
LRRC28-205ENST00000558248 WDR86Q86TI4 376 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 TMEM256Q8N2U0 113 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 KRTCAP2Q8N6L1 136 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF283Q8N7M2 679 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 POM121L12Q8N7R1 296 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 FER1L6-AS1Q8NA97 138 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 OR10G2Q8NGC3 310 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 OR4K5Q8NGD3 323 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 OR10D4PQ8NGN7 298 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 MRPL30Q8TCC3 161 aaKnown RBP2.83□□□□□ -1.96
LRRC28-205ENST00000558248 C10orf105Q8TEF2 133 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 CMBLQ96DG6 245 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 DERL3Q96Q80 235 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 RTL8AQ9BWD3 113 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 OR2D2Q9H210 308 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 C11orf68Q9H3H3 251 aaKnown RBP2.83□□□□□ -1.96
LRRC28-205ENST00000558248 PROK2Q9HC23 129 aa2.83□□□□□ -1.96
LRRC28-205ENST00000558248 RPUSD1Q9UJJ7 312 aaKnown RBP2.83□□□□□ -1.96
LRRC28-205ENST00000558248 RBM7Q9Y580 266 aaKnown RBP2.83□□□□□ -1.96
LRRC28-205ENST00000558248 MEIKINA0A087WXM9 373 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 A0A1W2PP18 115 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 LINC00862A6NCI5 91 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 ZFP92A6NM28 416 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 C9JAW5 83 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 H0YJW9 148 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 UBE2L6O14933 153 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 PIN1P1O15428 100 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 LY6HO94772 140 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 CDS2O95674 445 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms