RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 CT45A10P0DMU9 189 aa12.75□□□□□ -0.37
TUBB3-209ENST00000555609 CSN1S1P47710 185 aa12.75□□□□□ -0.37
TUBB3-209ENST00000555609 PCP4P48539 62 aa12.75□□□□□ -0.37
TUBB3-209ENST00000555609 SPATA12Q7Z6I5 190 aa12.75□□□□□ -0.37
TUBB3-209ENST00000555609 ATMQ13315 3056 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 IL4P05112 153 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 ZNF738Q8NE65 137 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 PRRC2CQ9Y520 2896 aaKnown RBP12.74□□□□□ -0.37
TUBB3-209ENST00000555609 ODF3BA8MYP8 253 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 LYNX1G3V0Z9 82 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 K7ENP7 123 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 GNG7O60262 68 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 LYNX1P0DP58 116 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 PRTN3P24158 256 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 C5orf64Q2M2E5 130 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 CCDC144NLQ6NUI1 221 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 C1orf122Q6ZSJ8 110 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 TTC9CQ8N5M4 171 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 NEU4Q8WWR8 484 aaPredicted RBP12.74□□□□□ -0.37
TUBB3-209ENST00000555609 THYN1Q9P016 225 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 COX11Q9Y6N1 276 aa12.74□□□□□ -0.37
TUBB3-209ENST00000555609 ARFGEF3Q5TH69 2177 aa12.73□□□□□ -0.37
TUBB3-209ENST00000555609 IGLV11-55A0A075B6I3 123 aa12.73□□□□□ -0.37
TUBB3-209ENST00000555609 FCGR2BP31994 310 aaPredicted RBP12.73□□□□□ -0.37
TUBB3-209ENST00000555609 HINT1P49773 126 aaPredicted RBP12.73□□□□□ -0.37
TUBB3-209ENST00000555609 DLX1P56177 255 aa12.73□□□□□ -0.37
TUBB3-209ENST00000555609 SAPCD1Q5SSQ6 148 aa12.73□□□□□ -0.37
TUBB3-209ENST00000555609 ZNF562Q6V9R5 426 aa12.73□□□□□ -0.37
TUBB3-209ENST00000555609 PMCHL2Q9BQD1 86 aa12.73□□□□□ -0.37
TUBB3-209ENST00000555609 RPS20P60866 119 aaKnown RBP12.72□□□□□ -0.37
TUBB3-209ENST00000555609 LINC01545Q5VT33 79 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 SLC25A34Q6PIV7 304 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 ZFYVE26Q68DK2 2539 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 ARMS2P0C7Q2 107 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 RPL7P18124 248 aaKnown RBP12.72□□□□□ -0.37
TUBB3-209ENST00000555609 COTL1Q14019 142 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 MALRD1Q5VYJ5 2156 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 OR10AG1Q8NH19 301 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 LINC01560Q8TB33 94 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 C17orf77Q96MU5 243 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 TMUB1Q9BVT8 246 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 U3KQK5 164 aa12.72□□□□□ -0.37
TUBB3-209ENST00000555609 CACNA1BQ00975 2339 aa12.71□□□□□ -0.37
TUBB3-209ENST00000555609 M0QZ24 198 aa12.71□□□□□ -0.37
TUBB3-209ENST00000555609 SRSF2Q01130 221 aaKnown RBP12.71□□□□□ -0.37
TUBB3-209ENST00000555609 PRR30Q53SZ7 412 aaPredicted RBP12.71□□□□□ -0.37
TUBB3-209ENST00000555609 LDLRAD2Q5SZI1 272 aa12.71□□□□□ -0.37
TUBB3-209ENST00000555609 FA2HQ7L5A8 372 aa12.71□□□□□ -0.37
TUBB3-209ENST00000555609 DPF1Q92782 380 aa12.71□□□□□ -0.37
TUBB3-209ENST00000555609 FANCD2OSQ96PS1 177 aa12.71□□□□□ -0.37
TUBB3-209ENST00000555609 SMG1Q96Q15 3661 aaKnown RBP12.71□□□□□ -0.37
TUBB3-209ENST00000555609 BOD1L1Q8NFC6 3051 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 LOC105371242A0A075B767 164 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 TMEM8BA6NDV4 472 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 CD24P25063 80 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 CRIP1P50238 77 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 C12orf54Q6X4T0 127 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 PIEZO2Q9H5I5 2752 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 ZGRF1Q86YA3 2104 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 TMEM189A5PLL7 270 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 PRB3Q04118 309 aaPredicted RBP12.7□□□□□ -0.38
TUBB3-209ENST00000555609 UBE2V1Q13404 147 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 EBI3Q14213 229 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 MINOS1Q5TGZ0 78 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 LINC00173Q6ZV60 143 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 ARPC1AQ92747 370 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 SCRT2Q9NQ03 307 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 C21orf62Q9NYP8 219 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 MINOS1-NBL1R4GNA1 71 aa12.7□□□□□ -0.38
TUBB3-209ENST00000555609 PLXNB1O43157 2135 aa12.69□□□□□ -0.38
TUBB3-209ENST00000555609 TOX4O94842 621 aa12.69□□□□□ -0.38
TUBB3-209ENST00000555609 ARF6P62330 175 aa12.69□□□□□ -0.38
TUBB3-209ENST00000555609 PRSS3P2Q8NHM4 247 aa12.69□□□□□ -0.38
TUBB3-209ENST00000555609 BMI1P35226 326 aa12.68□□□□□ -0.38
TUBB3-209ENST00000555609 PTTG1IPP53801 180 aa12.68□□□□□ -0.38
TUBB3-209ENST00000555609 ZNF747Q9BV97 191 aa12.68□□□□□ -0.38
TUBB3-209ENST00000555609 HILPDAQ9Y5L2 63 aa12.68□□□□□ -0.38
TUBB3-209ENST00000555609 TCF21O43680 179 aa12.68□□□□□ -0.38
TUBB3-209ENST00000555609 FAM104BQ5XKR9 115 aa12.68□□□□□ -0.38
TUBB3-209ENST00000555609 Q8N6K4 173 aa12.68□□□□□ -0.38
TUBB3-209ENST00000555609 SPENQ96T58 3664 aaKnown RBP12.67□□□□□ -0.38
TUBB3-209ENST00000555609 HES1Q14469 280 aa12.67□□□□□ -0.38
TUBB3-209ENST00000555609 KLK9Q2XQG4 91 aa12.67□□□□□ -0.38
TUBB3-209ENST00000555609 NPFFR1Q9GZQ6 430 aa12.67□□□□□ -0.38
TUBB3-209ENST00000555609 KLK9Q9UKQ9 250 aa12.67□□□□□ -0.38
TUBB3-209ENST00000555609 ATRXP46100 2492 aa12.67□□□□□ -0.38
TUBB3-209ENST00000555609 KMT2BQ9UMN6 2715 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-209ENST00000555609 hDV102S1A0JD36 115 aa12.66□□□□□ -0.38
TUBB3-209ENST00000555609 FAM90A27PA6NNH2 459 aa12.66□□□□□ -0.38
TUBB3-209ENST00000555609 F8W735 103 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-209ENST00000555609 RAB9AP51151 201 aa12.66□□□□□ -0.38
TUBB3-209ENST00000555609 UNQ5815/PRO19632Q6UWF5 114 aa12.66□□□□□ -0.38
TUBB3-209ENST00000555609 M0R3E3 92 aa12.65□□□□□ -0.38
TUBB3-209ENST00000555609 SH2D1AO60880 128 aa12.65□□□□□ -0.38
TUBB3-209ENST00000555609 HIST1H1AQ02539 215 aaPredicted RBP12.65□□□□□ -0.38
TUBB3-209ENST00000555609 ORMDL3Q8N138 153 aa12.65□□□□□ -0.38
TUBB3-209ENST00000555609 RABAC1Q9UI14 185 aa12.65□□□□□ -0.38
TUBB3-209ENST00000555609 CSN3P07498 182 aa12.65□□□□□ -0.38
TUBB3-209ENST00000555609 ZNF138P52744 262 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms