RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ODF1Q14990 250 aa2.63□□□□□ -1.99
SEC23A-207ENST00000554615 OR8I2Q8N0Y5 310 aa2.63□□□□□ -1.99
SEC23A-207ENST00000554615 ATOH7Q8N100 152 aa2.63□□□□□ -1.99
SEC23A-207ENST00000554615 DYNAPQ8N1N2 210 aa2.63□□□□□ -1.99
SEC23A-207ENST00000554615 DEFB123Q8N688 67 aa2.63□□□□□ -1.99
SEC23A-207ENST00000554615 C9orf85Q96MD7 179 aa2.63□□□□□ -1.99
SEC23A-207ENST00000554615 CCL13Q99616 98 aa2.63□□□□□ -1.99
SEC23A-207ENST00000554615 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
SEC23A-207ENST00000554615 WDFY4Q6ZS81 3184 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 TRBV7-1A0A0A6YYK4 115 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 A0A1W2PPV4 95 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 A6NDX4 124 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 SNURFLB1AK76 121 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 TOX4O94842 621 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 SMIM17P0DL12 118 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 PSG1P11464 419 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 NDPQ00604 133 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 SRYQ05066 204 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 COL5A1-AS1Q5SY13 56 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 BCL6BQ8N143 479 aaPredicted RBP2.62□□□□□ -1.99
SEC23A-207ENST00000554615 MRAP2Q96G30 205 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 PRR25Q96S07 402 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 TMUB1Q9BVT8 246 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 WNT10AQ9GZT5 417 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 CELSR3Q9NYQ7 3312 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 IGHV3-43A0A0B4J1X8 118 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 A0A1W2PPQ1 181 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 NDUFS7O75251 213 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 IGHV3-43DP0DP04 118 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 GPR6P46095 362 aaPredicted RBP2.62□□□□□ -1.99
SEC23A-207ENST00000554615 RPL27AP46776 148 aaKnown RBP2.62□□□□□ -1.99
SEC23A-207ENST00000554615 CACNG7P62955 275 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 LOXL1Q08397 574 aaPredicted RBP2.62□□□□□ -1.99
SEC23A-207ENST00000554615 MLANAQ16655 118 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 TIGITQ495A1 244 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 TOMM6Q96B49 74 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 C20orf78Q9BR46 151 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 SLC50A1Q9BRV3 221 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 HIGD1AQ9Y241 93 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 DCHS2Q6V1P9 2916 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 ARHGAP32A7KAX9 2087 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 NACAE9PAV3 2078 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 IGHV1-69DA0A0B4J2H0 117 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 HIGD1CA8MV81 97 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 HSPB6O14558 160 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 CCL25O15444 150 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 ARF6P62330 175 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 ERCC8Q13216 396 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 SAMD13Q5VXD3 122 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 Q8N8P6 123 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 ATP6V0E2Q8NHE4 81 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 BLNKQ8WV28 456 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 IL1F10Q8WWZ1 152 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 SRSF12Q8WXF0 261 aaKnown RBP2.62□□□□□ -1.99
SEC23A-207ENST00000554615 HSPB9Q9BQS6 159 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 TMEM70Q9BUB7 260 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 SCNM1Q9BWG6 230 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 ZNF469Q96JG9 3925 aaPredicted RBP2.62□□□□□ -1.99
SEC23A-207ENST00000554615 PIEZO2Q9H5I5 2752 aa2.62□□□□□ -1.99
SEC23A-207ENST00000554615 A0A0C4DFX4 3053 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 IGLV5-45A0A087WSX0 123 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 TCAPO15273 167 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 PYYP10082 97 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 LORP23490 312 aaPredicted RBP2.61□□□□□ -1.99
SEC23A-207ENST00000554615 CNTFRP26992 372 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 ZNF80P51504 273 aaPredicted RBP2.61□□□□□ -1.99
SEC23A-207ENST00000554615 UCNP55089 124 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 FAM27E3Q08E93 113 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 MPV17L2Q567V2 206 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 PRR27Q6MZM9 219 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 NFE4Q86UQ8 179 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 KLHDC1Q8N7A1 406 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 RNASE11Q8TAA1 199 aaKnown RBP2.61□□□□□ -1.99
SEC23A-207ENST00000554615 PSG8Q9UQ74 426 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 IGKV3D-20A0A0C4DH25 116 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 M0R1B8 84 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 NDUFS8O00217 210 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 NDUFB3O43676 98 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 IGHG2P01859 326 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 CCL3L1P16619 93 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 ZFAND2AQ8N6M9 145 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 TPRX1Q8N7U7 411 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 NEXN-AS1Q8NBZ9 246 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 NPIPB3Q92617 1050 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 SPOCK3Q9BQ16 436 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 PCNX2A6NKB5 2137 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 A0A1W2PPR1 153 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 AVPP01185 164 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 RNF224P0DH78 156 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 FCER1GP30273 86 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 SRIP30626 198 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 IER3P46695 156 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 UBE2D1P51668 147 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 SPATA45Q537H7 98 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 LYG1Q8N1E2 194 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 RNF125Q96EQ8 232 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 ZNRD1Q9P1U0 126 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 C11orf21Q9P2W6 132 aa2.61□□□□□ -1.99
SEC23A-207ENST00000554615 E9PLD3 99 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 RNASE4P34096 147 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms