RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 OR2J3O76001 311 aa9.46□□□□□ -0.9
SHMT2-214ENST00000554604 NDUFB4O95168 129 aa9.46□□□□□ -0.9
SHMT2-214ENST00000554604 IGHV3-48P01763 117 aa9.46□□□□□ -0.9
SHMT2-214ENST00000554604 ELOBQ15370 118 aa9.46□□□□□ -0.9
SHMT2-214ENST00000554604 C15orf32Q32M92 178 aa9.46□□□□□ -0.9
SHMT2-214ENST00000554604 C19orf35Q6ZS72 473 aa9.46□□□□□ -0.9
SHMT2-214ENST00000554604 ANAPC16Q96DE5 110 aa9.46□□□□□ -0.9
SHMT2-214ENST00000554604 ASCL2Q99929 193 aa9.46□□□□□ -0.9
SHMT2-214ENST00000554604 C9JCJ5 164 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 K7EIM0 57 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 IGLV1-51P01701 117 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 FABP1P07148 127 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 IGLC1P0CG04 106 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 RAB5BP61020 215 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 FAM209BQ5JX69 171 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 STXBP6Q8NFX7 210 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 OR51G1Q8NGK1 321 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 PEMTQ9UBM1 199 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 FBXL7Q9UJT9 491 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 LY96Q9Y6Y9 160 aa9.45□□□□□ -0.9
SHMT2-214ENST00000554604 IGLV11-55A0A075B6I3 123 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 TRAV30A0A087WSZ9 112 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.44□□□□□ -0.9
SHMT2-214ENST00000554604 SCO2A0A1W2PP80 73 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 BMPR1BO00238 502 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 TGOLN2O43493 480 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 HYPMO75409 117 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 UBE2L3P68036 154 aaKnown RBP9.44□□□□□ -0.9
SHMT2-214ENST00000554604 MORN5Q5VZ52 161 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 Q8WTZ3 238 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 OR51M1Q9H341 326 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 U3KQK5 164 aa9.44□□□□□ -0.9
SHMT2-214ENST00000554604 DNAH9Q9NYC9 4486 aa9.43□□□□□ -0.9
SHMT2-214ENST00000554604 TRBV24-1A0A075B6N3 115 aa9.43□□□□□ -0.9
SHMT2-214ENST00000554604 TRAV5A0A0B4J249 113 aa9.43□□□□□ -0.9
SHMT2-214ENST00000554604 PPP1R2P9O14990 202 aa9.43□□□□□ -0.9
SHMT2-214ENST00000554604 HIST1H1BP16401 226 aaKnown RBP9.43□□□□□ -0.9
SHMT2-214ENST00000554604 KLK9Q2XQG4 91 aa9.43□□□□□ -0.9
SHMT2-214ENST00000554604 LINC00305Q7Z4B0 112 aa9.43□□□□□ -0.9
SHMT2-214ENST00000554604 WWC2-AS2Q96NR7 200 aa9.43□□□□□ -0.9
SHMT2-214ENST00000554604 TCEAL7Q9BRU2 100 aa9.43□□□□□ -0.9
SHMT2-214ENST00000554604 KLK9Q9UKQ9 250 aa9.43□□□□□ -0.9
SHMT2-214ENST00000554604 IGHV3-21A0A0B4J1V1 117 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 PPP5D1E7EU14 171 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 H7BYZ3 331 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 GGCTO75223 188 aaKnown RBP9.42□□□□□ -0.9
SHMT2-214ENST00000554604 NDUFB8O95169 186 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 CSN3P07498 182 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 CXCL1P09341 107 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 OR10J4P0C629 311 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 ORM2P19652 201 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 TIGITQ495A1 244 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 LCN12Q6JVE5 192 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 OR1B1Q8NGR6 318 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 EEF1AKMT3Q96AZ1 226 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 FXYD5Q96DB9 178 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 FANCD2OSQ96PS1 177 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 DERL1Q9BUN8 251 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 BIN3Q9NQY0 253 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 THYN1Q9P016 225 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 S4R3C0 116 aa9.42□□□□□ -0.9
SHMT2-214ENST00000554604 TRBV20OR9-2A0A075B6H5 130 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 TGIF2-C20orf24A0A0A6YYL0 155 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 GGTLC3B5MD39 225 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 TOMM40O96008 361 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 IGKV1-17P01599 117 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 IGHV3-23P01764 117 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 PFN1P07737 140 aaKnown RBP9.41□□□□□ -0.9
SHMT2-214ENST00000554604 FRMD6-AS1P0C7T7 363 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 PSG1P11464 419 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 S100PP25815 95 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 ARL3P36405 182 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 MFAP4P55083 255 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 YPEL3P61236 119 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-214ENST00000554604 CLEC19AQ6UXS0 136 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 GTSCR1Q86UQ5 136 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 DYNLRB2Q8TF09 96 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 C2CD4CQ8TF44 421 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 TMEM190Q8WZ59 177 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 SIGLEC8Q9NYZ4 499 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 HIGD1AQ9Y241 93 aa9.41□□□□□ -0.9
SHMT2-214ENST00000554604 TRBV7-1A0A0A6YYK4 115 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 RD3LP0DJH9 198 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 PYYP10082 97 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 FCGR2BP31994 310 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-214ENST00000554604 RPS10P46783 165 aaKnown RBP9.4□□□□□ -0.9
SHMT2-214ENST00000554604 GALR1P47211 349 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 SUMO1P63165 101 aaKnown RBP9.4□□□□□ -0.9
SHMT2-214ENST00000554604 FAM106AQ4KMX7 169 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 SBSPONQ8IVN8 264 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 CCDC140Q96MF4 163 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 IMMP2LQ96T52 175 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 TXN2Q99757 166 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
SHMT2-214ENST00000554604 TMEM14CQ9P0S9 112 aa9.4□□□□□ -0.9
SHMT2-214ENST00000554604 URGCP-MRPS24S4R325 110 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms