RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 GP9P14770 177 aa15.32■□□□□ 0.04
CTDSP2-204ENST00000548823 RHOGP84095 191 aa15.32■□□□□ 0.04
CTDSP2-204ENST00000548823 TCTEX1D4Q5JR98 221 aa15.32■□□□□ 0.04
CTDSP2-204ENST00000548823 Q6ZS46 218 aa15.32■□□□□ 0.04
CTDSP2-204ENST00000548823 FAM223BA6NKX1 122 aa15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 G3V318 75 aa15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 CTSGP08311 255 aa15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 S100A7P31151 101 aa15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 MYCNOSP40205 109 aa15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 SUMO1P63165 101 aaKnown RBP15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 TMEM95Q3KNT9 176 aa15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 LINC01551Q86U37 167 aa15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 FAM223AQ8IWN6 122 aa15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 C2CD4CQ8TF44 421 aa15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 MCRIP2Q9BUT9 160 aaKnown RBP15.31■□□□□ 0.04
CTDSP2-204ENST00000548823 TRBV7-1A0A0A6YYK4 115 aa15.3■□□□□ 0.04
CTDSP2-204ENST00000548823 NBEAP1P0C6P0 100 aa15.3■□□□□ 0.04
CTDSP2-204ENST00000548823 BLCAPP62952 87 aa15.3■□□□□ 0.04
CTDSP2-204ENST00000548823 C15orf32Q32M92 178 aa15.3■□□□□ 0.04
CTDSP2-204ENST00000548823 ISOC2Q96AB3 205 aa15.3■□□□□ 0.04
CTDSP2-204ENST00000548823 EEF1AKMT3Q96AZ1 226 aa15.3■□□□□ 0.04
CTDSP2-204ENST00000548823 DERL1Q9BUN8 251 aa15.3■□□□□ 0.04
CTDSP2-204ENST00000548823 SH2D7A6NKC9 451 aaPredicted RBP15.29■□□□□ 0.04
CTDSP2-204ENST00000548823 PPP1R2P9O14990 202 aa15.29■□□□□ 0.04
CTDSP2-204ENST00000548823 IL4P05112 153 aa15.29■□□□□ 0.04
CTDSP2-204ENST00000548823 HIST1H1EP10412 219 aaKnown RBP15.29■□□□□ 0.04
CTDSP2-204ENST00000548823 ZNF600Q6ZNG1 722 aa15.29■□□□□ 0.04
CTDSP2-204ENST00000548823 ELOVL1Q9BW60 279 aa15.29■□□□□ 0.04
CTDSP2-204ENST00000548823 TRBV20OR9-2A0A075B6H5 130 aa15.28■□□□□ 0.04
CTDSP2-204ENST00000548823 HELTA6NFD8 242 aa15.28■□□□□ 0.04
CTDSP2-204ENST00000548823 ATF4P18848 351 aaPredicted RBP15.28■□□□□ 0.04
CTDSP2-204ENST00000548823 CRYBB3P26998 211 aa15.28■□□□□ 0.04
CTDSP2-204ENST00000548823 RPL35P42766 123 aaKnown RBP15.28■□□□□ 0.04
CTDSP2-204ENST00000548823 TAS2R60P59551 318 aa15.28■□□□□ 0.04
CTDSP2-204ENST00000548823 ZNF329Q86UD4 541 aa15.28■□□□□ 0.04
CTDSP2-204ENST00000548823 FAM24BQ8N5W8 94 aa15.28■□□□□ 0.04
CTDSP2-204ENST00000548823 ASCL2Q99929 193 aa15.28■□□□□ 0.04
CTDSP2-204ENST00000548823 AP4M1O00189 453 aa15.27■□□□□ 0.04
CTDSP2-204ENST00000548823 PPIFP30405 207 aaKnown RBP15.27■□□□□ 0.04
CTDSP2-204ENST00000548823 ADMP35318 185 aa15.27■□□□□ 0.04
CTDSP2-204ENST00000548823 ELOBQ15370 118 aa15.27■□□□□ 0.04
CTDSP2-204ENST00000548823 BPIFA4PQ86YQ2 179 aa15.27■□□□□ 0.04
CTDSP2-204ENST00000548823 S4R3C0 116 aa15.27■□□□□ 0.04
CTDSP2-204ENST00000548823 OR2T8A6NH00 312 aa15.26■□□□□ 0.03
CTDSP2-204ENST00000548823 H7BYZ3 331 aa15.26■□□□□ 0.03
CTDSP2-204ENST00000548823 RAB5AP20339 215 aa15.26■□□□□ 0.03
CTDSP2-204ENST00000548823 ATP5G2Q06055 141 aa15.26■□□□□ 0.03
CTDSP2-204ENST00000548823 USF2Q15853 346 aaPredicted RBP15.26■□□□□ 0.03
CTDSP2-204ENST00000548823 C9orf152Q5JTZ5 239 aa15.26■□□□□ 0.03
CTDSP2-204ENST00000548823 ZNF98A6NK75 572 aa15.25■□□□□ 0.03
CTDSP2-204ENST00000548823 LYPD1Q8N2G4 141 aa15.25■□□□□ 0.03
CTDSP2-204ENST00000548823 OR4X2Q8NGF9 303 aa15.25■□□□□ 0.03
CTDSP2-204ENST00000548823 OCC1Q8TAD7 63 aa15.25■□□□□ 0.03
CTDSP2-204ENST00000548823 CCDC140Q96MF4 163 aa15.25■□□□□ 0.03
CTDSP2-204ENST00000548823 CHRDL1Q9BU40 450 aa15.25■□□□□ 0.03
CTDSP2-204ENST00000548823 TRBV24-1A0A075B6N3 115 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 MRPS12O15235 138 aaKnown RBP15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 S100A9P06702 114 aaKnown RBP15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 CNN1P51911 297 aaKnown RBP15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 FLI1Q01543 452 aaPredicted RBP15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 C5orf17Q8NAS9 161 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 USMG5Q96IX5 58 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 IMMP2LQ96T52 175 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 OTORQ9NRC9 128 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 EPDR1Q9UM22 224 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 LOC105371267A0A1B0GV96 52 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 BMPR1BO00238 502 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 PEX7O00628 323 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 TGOLN2O43493 480 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 IGHV3-23P01764 117 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 CLEC3BP05452 202 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 PFN1P07737 140 aaKnown RBP15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 IGLC2P0DOY2 106 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 GNG4P50150 75 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 RAB9AP51151 201 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 KHDC1LQ5JSQ8 128 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 LEMD1Q68G75 181 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 ZNF414Q96IQ9 312 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 PYGO2Q9BRQ0 406 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 ZNF586Q9NXT0 402 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 RABAC1Q9UI14 185 aa15.24■□□□□ 0.03
CTDSP2-204ENST00000548823 HUWE1Q7Z6Z7 4374 aaKnown RBP15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 GPR183P32249 361 aa15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 RANP62826 216 aaKnown RBP15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 PDE6HQ13956 83 aa15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 BLNKQ8WV28 456 aa15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 SMIM12Q96EX1 92 aa15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 SFRP2Q96HF1 295 aa15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 IGF2BP2-AS1Q96M15 143 aa15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 OR5B12Q96R08 314 aa15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 MLXQ9UH92 298 aa15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 KLF12Q9Y4X4 402 aa15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 CSMD3Q7Z407 3707 aa15.23■□□□□ 0.03
CTDSP2-204ENST00000548823 TRBV19A0A075B6N1 114 aa15.22■□□□□ 0.03
CTDSP2-204ENST00000548823 PGPA6NDG6 321 aa15.22■□□□□ 0.03
CTDSP2-204ENST00000548823 IGLV1-40P01703 118 aa15.22■□□□□ 0.03
CTDSP2-204ENST00000548823 TRGV3P03979 118 aa15.22■□□□□ 0.03
CTDSP2-204ENST00000548823 S100PP25815 95 aa15.22■□□□□ 0.03
CTDSP2-204ENST00000548823 CFHR3Q02985 330 aa15.22■□□□□ 0.03
CTDSP2-204ENST00000548823 RELQ04864 619 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms