RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ZNF785A8K8V0 405 aa12.16□□□□□ -0.46
BRF1-212ENST00000547562 DIRC3C9JPN6 131 aa12.16□□□□□ -0.46
BRF1-212ENST00000547562 IGHV3-23P01764 117 aa12.16□□□□□ -0.46
BRF1-212ENST00000547562 PSG3Q16557 428 aa12.16□□□□□ -0.46
BRF1-212ENST00000547562 ZC2HC1AQ96GY0 325 aa12.16□□□□□ -0.46
BRF1-212ENST00000547562 AJUBAQ96IF1 538 aa12.16□□□□□ -0.46
BRF1-212ENST00000547562 C1RLQ9NZP8 487 aa12.16□□□□□ -0.46
BRF1-212ENST00000547562 PSG8Q9UQ74 426 aa12.16□□□□□ -0.46
BRF1-212ENST00000547562 NTF3P20783 257 aa12.15□□□□□ -0.46
BRF1-212ENST00000547562 FAM120AOSQ5T036 256 aa12.15□□□□□ -0.46
BRF1-212ENST00000547562 VAMP8Q9BV40 100 aa12.15□□□□□ -0.46
BRF1-212ENST00000547562 OR2T8A6NH00 312 aa12.15□□□□□ -0.47
BRF1-212ENST00000547562 UQCRFS1P47985 274 aa12.15□□□□□ -0.47
BRF1-212ENST00000547562 LMO4P61968 165 aa12.15□□□□□ -0.47
BRF1-212ENST00000547562 BPESC1Q9GZL8 116 aa12.15□□□□□ -0.47
BRF1-212ENST00000547562 PAM16Q9Y3D7 125 aa12.15□□□□□ -0.47
BRF1-212ENST00000547562 M0R3E3 92 aa12.14□□□□□ -0.47
BRF1-212ENST00000547562 PRR31Q5SQ13 230 aa12.14□□□□□ -0.47
BRF1-212ENST00000547562 AAMDCQ9H7C9 122 aa12.14□□□□□ -0.47
BRF1-212ENST00000547562 HSBP1O75506 76 aa12.13□□□□□ -0.47
BRF1-212ENST00000547562 SCGB2A1O75556 95 aa12.13□□□□□ -0.47
BRF1-212ENST00000547562 CTSGP08311 255 aa12.13□□□□□ -0.47
BRF1-212ENST00000547562 C3orf79P0CE67 100 aa12.13□□□□□ -0.47
BRF1-212ENST00000547562 C19orf84I3L1E1 186 aa12.13□□□□□ -0.47
BRF1-212ENST00000547562 PRB4P10163 310 aaPredicted RBP12.13□□□□□ -0.47
BRF1-212ENST00000547562 SAA4P35542 130 aa12.13□□□□□ -0.47
BRF1-212ENST00000547562 FOXA3P55318 350 aaPredicted RBP12.13□□□□□ -0.47
BRF1-212ENST00000547562 BORCS7Q96B45 105 aa12.13□□□□□ -0.47
BRF1-212ENST00000547562 TXN2Q99757 166 aa12.13□□□□□ -0.47
BRF1-212ENST00000547562 ASCL2Q99929 193 aa12.13□□□□□ -0.47
BRF1-212ENST00000547562 EREGO14944 169 aa12.12□□□□□ -0.47
BRF1-212ENST00000547562 APOHP02749 345 aaPredicted RBP12.12□□□□□ -0.47
BRF1-212ENST00000547562 SVEP1Q4LDE5 3571 aa12.12□□□□□ -0.47
BRF1-212ENST00000547562 OVOL3O00110 214 aa12.12□□□□□ -0.47
BRF1-212ENST00000547562 HAX1O00165 279 aa12.12□□□□□ -0.47
BRF1-212ENST00000547562 RPL7P18124 248 aaKnown RBP12.12□□□□□ -0.47
BRF1-212ENST00000547562 GNLYP22749 145 aa12.12□□□□□ -0.47
BRF1-212ENST00000547562 RNASEKQ6P5S7 137 aaKnown RBP12.12□□□□□ -0.47
BRF1-212ENST00000547562 LPAR2Q9HBW0 351 aa12.12□□□□□ -0.47
BRF1-212ENST00000547562 PSG9Q00887 426 aa12.11□□□□□ -0.47
BRF1-212ENST00000547562 FAM110DQ8TAY7 271 aaPredicted RBP12.11□□□□□ -0.47
BRF1-212ENST00000547562 MIEN1Q9BRT3 115 aa12.11□□□□□ -0.47
BRF1-212ENST00000547562 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
BRF1-212ENST00000547562 SNHG12Q9BXW3 62 aa12.11□□□□□ -0.47
BRF1-212ENST00000547562 CACNA1BQ00975 2339 aa12.11□□□□□ -0.47
BRF1-212ENST00000547562 SH2D7A6NKC9 451 aaPredicted RBP12.11□□□□□ -0.47
BRF1-212ENST00000547562 M0R2Z0 102 aa12.11□□□□□ -0.47
BRF1-212ENST00000547562 CHEK1O14757 476 aa12.11□□□□□ -0.47
BRF1-212ENST00000547562 CRIP1P50238 77 aa12.11□□□□□ -0.47
BRF1-212ENST00000547562 RABAC1Q9UI14 185 aa12.11□□□□□ -0.47
BRF1-212ENST00000547562 SERTM2A0A1B0GWG4 89 aa12.1□□□□□ -0.47
BRF1-212ENST00000547562 CSN1S1P47710 185 aa12.1□□□□□ -0.47
BRF1-212ENST00000547562 UNQ5815/PRO19632Q6UWF5 114 aa12.1□□□□□ -0.47
BRF1-212ENST00000547562 URB1-AS1Q96HZ7 61 aa12.1□□□□□ -0.47
BRF1-212ENST00000547562 LOC102724200A0A096LPH7 203 aaPredicted RBP12.1□□□□□ -0.47
BRF1-212ENST00000547562 FAM181BA6NEQ2 426 aa12.1□□□□□ -0.47
BRF1-212ENST00000547562 ECSCRQ19T08 205 aa12.1□□□□□ -0.47
BRF1-212ENST00000547562 FAM162BQ5T6X4 162 aa12.1□□□□□ -0.47
BRF1-212ENST00000547562 ZNF705AQ6ZN79 300 aaPredicted RBP12.1□□□□□ -0.47
BRF1-212ENST00000547562 A0A1B0GUT8 65 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 M0R143 59 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 ATP6V0E1O15342 81 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 RAB4AP20338 218 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 KLK9Q2XQG4 91 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 C15orf32Q32M92 178 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 CYB5R2Q6BCY4 276 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 C8orf49Q96NF6 230 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 NDFIP1Q9BT67 221 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 KLK9Q9UKQ9 250 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 NPFFO15130 113 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 CT45A10P0DMU9 189 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 ZNF502Q8TBZ5 544 aa12.09□□□□□ -0.47
BRF1-212ENST00000547562 CTRLP40313 264 aa12.08□□□□□ -0.48
BRF1-212ENST00000547562 ARL6IP6Q8N6S5 226 aa12.08□□□□□ -0.48
BRF1-212ENST00000547562 ABCA2Q9BZC7 2435 aa12.08□□□□□ -0.48
BRF1-212ENST00000547562 TCAPO15273 167 aa12.08□□□□□ -0.48
BRF1-212ENST00000547562 ARMS2P0C7Q2 107 aa12.08□□□□□ -0.48
BRF1-212ENST00000547562 GPR183P32249 361 aa12.08□□□□□ -0.48
BRF1-212ENST00000547562 RHOGP84095 191 aa12.08□□□□□ -0.48
BRF1-212ENST00000547562 SMAD5-AS1Q9Y6J3 95 aa12.08□□□□□ -0.48
BRF1-212ENST00000547562 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.07□□□□□ -0.48
BRF1-212ENST00000547562 CENPVL3A0A0U1RRI6 287 aa12.07□□□□□ -0.48
BRF1-212ENST00000547562 IGHV4-39P01824 125 aa12.07□□□□□ -0.48
BRF1-212ENST00000547562 S100A7P31151 101 aa12.07□□□□□ -0.48
BRF1-212ENST00000547562 RIGQ13278 110 aa12.07□□□□□ -0.48
BRF1-212ENST00000547562 SPATA45Q537H7 98 aa12.07□□□□□ -0.48
BRF1-212ENST00000547562 Q6AWC8 147 aa12.07□□□□□ -0.48
BRF1-212ENST00000547562 EBLN2Q6P2I7 272 aa12.07□□□□□ -0.48
BRF1-212ENST00000547562 CHCHD1Q96BP2 118 aaKnown RBP12.07□□□□□ -0.48
BRF1-212ENST00000547562 PKD1L2Q7Z442 2459 aa12.07□□□□□ -0.48
BRF1-212ENST00000547562 IGKV2-40A0A087WW87 121 aaPredicted RBP12.07□□□□□ -0.48
BRF1-212ENST00000547562 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
BRF1-212ENST00000547562 M0QZ24 198 aa12.07□□□□□ -0.48
BRF1-212ENST00000547562 IGKV2D-40P01614 121 aaPredicted RBP12.07□□□□□ -0.48
BRF1-212ENST00000547562 IGHV3OR16-8A0A075B7F1 116 aa12.06□□□□□ -0.48
BRF1-212ENST00000547562 C2orf70A6NJV1 201 aa12.06□□□□□ -0.48
BRF1-212ENST00000547562 MRPL52Q86TS9 123 aaKnown RBP12.06□□□□□ -0.48
BRF1-212ENST00000547562 SPTAN1Q13813 2472 aaKnown RBP12.06□□□□□ -0.48
BRF1-212ENST00000547562 A0A1B0GW15 77 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms