RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 HIGD1CA8MV81 97 aa14.48□□□□□ -0.09
VDR-204ENST00000547065 ZNF253O75346 499 aa14.48□□□□□ -0.09
VDR-204ENST00000547065 SRSF1Q07955 248 aaKnown RBP eCLIP14.48□□□□□ -0.09
VDR-204ENST00000547065 ATP5L2Q7Z4Y8 100 aa14.48□□□□□ -0.09
VDR-204ENST00000547065 FAM223AQ8IWN6 122 aa14.48□□□□□ -0.09
VDR-204ENST00000547065 CIARTQ8N365 385 aaPredicted RBP14.48□□□□□ -0.09
VDR-204ENST00000547065 OR4B1Q8NGF8 309 aa14.48□□□□□ -0.09
VDR-204ENST00000547065 CCDC140Q96MF4 163 aa14.48□□□□□ -0.09
VDR-204ENST00000547065 GFRA4Q9GZZ7 299 aa14.48□□□□□ -0.09
VDR-204ENST00000547065 ZFAND3Q9H8U3 227 aa14.48□□□□□ -0.09
VDR-204ENST00000547065 ABCA2Q9BZC7 2435 aa14.48□□□□□ -0.09
VDR-204ENST00000547065 USP24Q9UPU5 2620 aa14.48□□□□□ -0.09
VDR-204ENST00000547065 NPIPB6E9PJ23 425 aa14.47□□□□□ -0.09
VDR-204ENST00000547065 M0QZK8 103 aa14.47□□□□□ -0.09
VDR-204ENST00000547065 APCSP02743 223 aa14.47□□□□□ -0.09
VDR-204ENST00000547065 JOSD1Q15040 202 aaPredicted RBP14.47□□□□□ -0.09
VDR-204ENST00000547065 GNB4Q9HAV0 340 aa14.47□□□□□ -0.09
VDR-204ENST00000547065 SMAD5-AS1Q9Y6J3 95 aa14.47□□□□□ -0.09
VDR-204ENST00000547065 FAM231BA6NCW3 169 aa14.47□□□□□ -0.09
VDR-204ENST00000547065 H3BUX3 64 aa14.47□□□□□ -0.09
VDR-204ENST00000547065 IGF1P05019 195 aa14.47□□□□□ -0.09
VDR-204ENST00000547065 C9orf152Q5JTZ5 239 aa14.47□□□□□ -0.09
VDR-204ENST00000547065 LINC01356Q8N9X3 169 aa14.47□□□□□ -0.09
VDR-204ENST00000547065 SOX21Q9Y651 276 aaPredicted RBP14.47□□□□□ -0.09
VDR-204ENST00000547065 IGHV3-35A0A0C4DH35 117 aa14.46□□□□□ -0.09
VDR-204ENST00000547065 M0R3E3 92 aa14.46□□□□□ -0.09
VDR-204ENST00000547065 ESDP10768 282 aa14.46□□□□□ -0.09
VDR-204ENST00000547065 COL8A1P27658 744 aa14.46□□□□□ -0.09
VDR-204ENST00000547065 RELQ04864 619 aaPredicted RBP14.46□□□□□ -0.09
VDR-204ENST00000547065 LY6EQ16553 131 aa14.46□□□□□ -0.09
VDR-204ENST00000547065 TP53TG3Q9ULZ0 132 aa14.46□□□□□ -0.09
VDR-204ENST00000547065 A0A1B0GUS0 222 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 NUPR1O60356 82 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 BRI3O95415 125 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 IGHG2P01859 326 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 C16orf54Q6UWD8 224 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 BAGE3Q86Y29 109 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 FBLL1A6NHQ2 334 aaKnown RBP14.45□□□□□ -0.1
VDR-204ENST00000547065 PAFAH1B2P68402 229 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 OR10J3Q5JRS4 329 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 TCF24Q7RTU0 167 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 OR5R1Q8NH85 324 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 COL12A1Q99715 3063 aa14.45□□□□□ -0.1
VDR-204ENST00000547065 BUB3O43684 328 aa14.44□□□□□ -0.1
VDR-204ENST00000547065 AVPP01185 164 aa14.44□□□□□ -0.1
VDR-204ENST00000547065 KIAA1644Q3SXP7 199 aa14.44□□□□□ -0.1
VDR-204ENST00000547065 C1orf194Q5T5A4 169 aa14.44□□□□□ -0.1
VDR-204ENST00000547065 ZC2HC1AQ96GY0 325 aa14.44□□□□□ -0.1
VDR-204ENST00000547065 IGHV3OR16-8A0A075B7F1 116 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 A0A087X0K7 114 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 A0A1B0GXF2 115 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 A1L4Q6 167 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 CLPSL1A2RUU4 121 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 ZNF785A8K8V0 405 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 H3BUA1 57 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 TRGV3P03979 118 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 CDPF1Q6NVV7 123 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 RBPMS2Q6ZRY4 209 aaKnown RBP14.43□□□□□ -0.1
VDR-204ENST00000547065 GTSF1Q8WW33 167 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 NOL4LQ96MY1 436 aaPredicted RBP14.43□□□□□ -0.1
VDR-204ENST00000547065 LINC00527Q9UJ94 153 aa14.43□□□□□ -0.1
VDR-204ENST00000547065 A0A096LNT2 108 aa14.42□□□□□ -0.1
VDR-204ENST00000547065 J3QLI3 93 aa14.42□□□□□ -0.1
VDR-204ENST00000547065 SERF1AO75920 110 aa14.42□□□□□ -0.1
VDR-204ENST00000547065 GZMBP10144 247 aa14.42□□□□□ -0.1
VDR-204ENST00000547065 TPPP2P59282 170 aa14.42□□□□□ -0.1
VDR-204ENST00000547065 GDF5OSQ5U4N7 250 aa14.42□□□□□ -0.1
VDR-204ENST00000547065 OR2D3Q8NGH3 330 aa14.42□□□□□ -0.1
VDR-204ENST00000547065 METTL26Q96S19 204 aa14.42□□□□□ -0.1
VDR-204ENST00000547065 PGLYRP4Q96LB8 373 aa14.42□□□□□ -0.1
VDR-204ENST00000547065 MYO18BQ8IUG5 2567 aa14.41□□□□□ -0.1
VDR-204ENST00000547065 SRIP30626 198 aa14.41□□□□□ -0.1
VDR-204ENST00000547065 FOXA3P55318 350 aaPredicted RBP14.41□□□□□ -0.1
VDR-204ENST00000547065 LINC00310P59036 64 aa14.41□□□□□ -0.1
VDR-204ENST00000547065 HBBP68871 147 aa14.41□□□□□ -0.1
VDR-204ENST00000547065 SLAQ13239 276 aa14.41□□□□□ -0.1
VDR-204ENST00000547065 SAPCD1Q5SSQ6 148 aa14.41□□□□□ -0.1
VDR-204ENST00000547065 USMG5Q96IX5 58 aa14.41□□□□□ -0.1
VDR-204ENST00000547065 CHEK1O14757 476 aa14.4□□□□□ -0.1
VDR-204ENST00000547065 PPIFP30405 207 aaKnown RBP14.4□□□□□ -0.1
VDR-204ENST00000547065 CAMPP49913 170 aa14.4□□□□□ -0.1
VDR-204ENST00000547065 COX8CQ7Z4L0 72 aa14.4□□□□□ -0.1
VDR-204ENST00000547065 U3KQE9 123 aa14.4□□□□□ -0.1
VDR-204ENST00000547065 SPG11Q96JI7 2443 aa14.4□□□□□ -0.1
VDR-204ENST00000547065 CT45A10P0DMU9 189 aa14.39□□□□□ -0.11
VDR-204ENST00000547065 CRIP1P50238 77 aa14.39□□□□□ -0.11
VDR-204ENST00000547065 Q71RC1 249 aaPredicted RBP14.39□□□□□ -0.11
VDR-204ENST00000547065 ZNF462Q96JM2 2506 aa14.39□□□□□ -0.11
VDR-204ENST00000547065 A8MWP6 167 aa14.39□□□□□ -0.11
VDR-204ENST00000547065 F2Z2F3 143 aa14.39□□□□□ -0.11
VDR-204ENST00000547065 IGHG4P01861 327 aa14.39□□□□□ -0.11
VDR-204ENST00000547065 BLCAPP62952 87 aa14.39□□□□□ -0.11
VDR-204ENST00000547065 LOXL1Q08397 574 aaPredicted RBP14.39□□□□□ -0.11
VDR-204ENST00000547065 LCN12Q6JVE5 192 aa14.39□□□□□ -0.11
VDR-204ENST00000547065 PRDM13Q9H4Q3 707 aa14.39□□□□□ -0.11
VDR-204ENST00000547065 IGKV2-40A0A087WW87 121 aaPredicted RBP14.38□□□□□ -0.11
VDR-204ENST00000547065 IGKV2D-40P01614 121 aaPredicted RBP14.38□□□□□ -0.11
VDR-204ENST00000547065 ARL3P36405 182 aa14.38□□□□□ -0.11
VDR-204ENST00000547065 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.38□□□□□ -0.11
VDR-204ENST00000547065 SLC50A1Q9BRV3 221 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms