RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 APCP25054 2843 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 CSN3P07498 182 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 KRTDAPP60985 99 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 DEFA6Q01524 100 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 HIST2H2BCQ6DN03 193 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 PIMREGQ9BSJ6 248 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 C1RLQ9NZP8 487 aa9.98□□□□□ -0.81
SCAF11-209ENST00000547018 H0Y8G0 127 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 FSTL3O95633 263 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 UBE2E1P51965 193 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 C5orf17Q8NAS9 161 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 STXBP6Q8NFX7 210 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 TMEM18Q96B42 140 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 HIF1ANQ9NWT6 349 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 THYN1Q9P016 225 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 H3BUX3 64 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 TGOLN2O43493 480 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 CD99P14209 185 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 TMEM95Q3KNT9 176 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 IGF2BP2-AS1Q96M15 143 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 GCGP01275 180 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 BLCAPP62952 87 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 RNF182Q8N6D2 247 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 NUP35Q8NFH5 326 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 GPR82Q96P67 336 aa9.97□□□□□ -0.81
SCAF11-209ENST00000547018 INS-IGF2F8WCM5 200 aa9.96□□□□□ -0.81
SCAF11-209ENST00000547018 HIST1H1EP10412 219 aaKnown RBP9.96□□□□□ -0.81
SCAF11-209ENST00000547018 SLAQ13239 276 aa9.96□□□□□ -0.81
SCAF11-209ENST00000547018 COTL1Q14019 142 aa9.96□□□□□ -0.81
SCAF11-209ENST00000547018 HIST2H2BDQ6DRA6 164 aa9.96□□□□□ -0.81
SCAF11-209ENST00000547018 Q6ZS46 218 aa9.96□□□□□ -0.81
SCAF11-209ENST00000547018 ATG101Q9BSB4 218 aa9.96□□□□□ -0.81
SCAF11-209ENST00000547018 PF4V1P10720 104 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 AMTP48728 403 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 C8orf49Q96NF6 230 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 RCHY1Q96PM5 261 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 OSTCQ9NRP0 149 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 IGLV11-55A0A075B6I3 123 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 NDUFA3O95167 84 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 SRD5A1P18405 259 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 PMCHL1Q16048 86 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 NPBQ8NG41 125 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 ARL2-SNX15V9GYD0 113 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 TGFAP01135 160 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 APCSP02743 223 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 CTSGP08311 255 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 ZNF138P52744 262 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 DEFB1P60022 68 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 ATOH7Q8N100 152 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 RNF5Q99942 180 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 AAMDCQ9H7C9 122 aa9.95□□□□□ -0.82
SCAF11-209ENST00000547018 EGR2P11161 476 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-209ENST00000547018 PPIFP30405 207 aaKnown RBP9.94□□□□□ -0.82
SCAF11-209ENST00000547018 TOMM20LQ6UXN7 152 aa9.94□□□□□ -0.82
SCAF11-209ENST00000547018 VN1R17PQ8TDU5 208 aa9.94□□□□□ -0.82
SCAF11-209ENST00000547018 SHANK2-AS3Q9BTD1 123 aa9.94□□□□□ -0.82
SCAF11-209ENST00000547018 SERTM2A0A1B0GWG4 89 aa9.94□□□□□ -0.82
SCAF11-209ENST00000547018 AVPP01185 164 aa9.94□□□□□ -0.82
SCAF11-209ENST00000547018 APOHP02749 345 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-209ENST00000547018 MINOS1Q5TGZ0 78 aa9.94□□□□□ -0.82
SCAF11-209ENST00000547018 RNASEKQ6P5S7 137 aaKnown RBP9.94□□□□□ -0.82
SCAF11-209ENST00000547018 MINOS1-NBL1R4GNA1 71 aa9.94□□□□□ -0.82
SCAF11-209ENST00000547018 FLNBO75369 2602 aaKnown RBP9.94□□□□□ -0.82
SCAF11-209ENST00000547018 TRGV3P03979 118 aa9.94□□□□□ -0.82
SCAF11-209ENST00000547018 TAS2R60P59551 318 aa9.94□□□□□ -0.82
SCAF11-209ENST00000547018 TMEM75Q8N9X5 138 aa9.94□□□□□ -0.82
SCAF11-209ENST00000547018 VWC2LB2RUY7 222 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 TYMSP04818 313 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 PAX2Q02962 417 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 ERCC8Q13216 396 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 TRBV19A0A075B6N1 114 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 TPPP2P59282 170 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 KRTAP10-9P60411 292 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 TMEM183BQ1AE95 376 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 GBGT1Q8N5D6 347 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 CLEC5AQ9NY25 188 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 MRPL27Q9P0M9 148 aaKnown RBP9.93□□□□□ -0.82
SCAF11-209ENST00000547018 RABAC1Q9UI14 185 aa9.93□□□□□ -0.82
SCAF11-209ENST00000547018 NPIPB5A8MRT5 1133 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 TCAPO15273 167 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 TRBV12-3P01733 135 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 GDF5OSQ5U4N7 250 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 WFDC12Q8WWY7 111 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 F8W735 103 aaPredicted RBP9.92□□□□□ -0.82
SCAF11-209ENST00000547018 TOMM40O96008 361 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 CSN1S1P47710 185 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 TMEM136Q6ZRR5 245 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 SIGLECL1Q8N7X8 197 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 ZC2HC1AQ96GY0 325 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 IGHV1-69DA0A0B4J2H0 117 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 RNF223E7ERA6 249 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 IGHV1-69P01742 117 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 TDRG1Q3Y452 100 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 PVRIGQ6DKI7 326 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 KLK15Q9H2R5 256 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 OTORQ9NRC9 128 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 TP53TG3Q9ULZ0 132 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 PSG8Q9UQ74 426 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 PAM16Q9Y3D7 125 aa9.92□□□□□ -0.82
SCAF11-209ENST00000547018 BMPR1BO00238 502 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms