RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 C17orf82Q86X59 251 aaPredicted RBP9.57□□□□□ -0.88
CIT-217ENST00000545913 TCRAP04437 139 aa9.57□□□□□ -0.88
CIT-217ENST00000545913 HIST3H2BBQ8N257 126 aa9.57□□□□□ -0.88
CIT-217ENST00000545913 ZNF876PQ49A33 203 aa9.57□□□□□ -0.88
CIT-217ENST00000545913 LINC00527Q9UJ94 153 aa9.57□□□□□ -0.88
CIT-217ENST00000545913 MBD3L4A6NDZ8 208 aaPredicted RBP9.57□□□□□ -0.88
CIT-217ENST00000545913 MBD3L3A6NE82 208 aaPredicted RBP9.57□□□□□ -0.88
CIT-217ENST00000545913 MBD3L5A6NJ08 208 aaPredicted RBP9.57□□□□□ -0.88
CIT-217ENST00000545913 LEPROTO15243 131 aa9.57□□□□□ -0.88
CIT-217ENST00000545913 KLHL30-AS1Q8NEE0 82 aa9.57□□□□□ -0.88
CIT-217ENST00000545913 MBD3L2Q8NHZ7 208 aaPredicted RBP9.57□□□□□ -0.88
CIT-217ENST00000545913 FAM90A2PQ658T7 463 aa9.57□□□□□ -0.88
CIT-217ENST00000545913 LYZL1Q6UWQ5 148 aa9.57□□□□□ -0.88
CIT-217ENST00000545913 PTPN13Q12923 2485 aa9.57□□□□□ -0.88
CIT-217ENST00000545913 C10orf55Q5SWW7 151 aa9.57□□□□□ -0.88
CIT-217ENST00000545913 SH2D1AO60880 128 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 SELLP14151 372 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 RPP25LQ8N5L8 163 aaKnown RBP9.56□□□□□ -0.88
CIT-217ENST00000545913 MDS2Q8NDY4 140 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 RASL10AQ92737 203 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 MUC6Q6W4X9 2439 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 FCN3O75636 299 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 LINC01356Q8N9X3 169 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 GPR179Q6PRD1 2367 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 Q6P435 159 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 RFNGQ9Y644 331 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 IGHV3-73A0A0B4J1V6 119 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 IGKV1-5P01602 117 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 GLRX5Q86SX6 157 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 RNF114Q9Y508 228 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 A0A0U1RRA0 63 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 EFNA2O43921 213 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 NCR2O95944 276 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 GAFA1Q96PS6 74 aa9.56□□□□□ -0.88
CIT-217ENST00000545913 CXCL1P09341 107 aa9.55□□□□□ -0.88
CIT-217ENST00000545913 GATA3P23771 443 aa9.55□□□□□ -0.88
CIT-217ENST00000545913 TMEM249Q2WGJ8 235 aa9.55□□□□□ -0.88
CIT-217ENST00000545913 DSCAML1Q8TD84 2053 aa9.55□□□□□ -0.88
CIT-217ENST00000545913 AMBPP02760 352 aa9.55□□□□□ -0.88
CIT-217ENST00000545913 DAZ1Q9NQZ3 744 aaKnown RBP9.55□□□□□ -0.88
CIT-217ENST00000545913 PSCAO43653 123 aa9.55□□□□□ -0.88
CIT-217ENST00000545913 NDPQ00604 133 aa9.55□□□□□ -0.88
CIT-217ENST00000545913 MRPL27Q9P0M9 148 aaKnown RBP9.55□□□□□ -0.88
CIT-217ENST00000545913 CSTL1Q9H114 145 aa9.55□□□□□ -0.88
CIT-217ENST00000545913 DLX4Q92988 240 aaPredicted RBP9.55□□□□□ -0.88
CIT-217ENST00000545913 RNF166Q96A37 237 aaPredicted RBP9.55□□□□□ -0.88
CIT-217ENST00000545913 SPATA31B1PQ5VZV4 182 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 ZFAND6Q6FIF0 208 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 ITGB1BP1O14713 200 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 RPL35AP18077 110 aaKnown RBP9.54□□□□□ -0.88
CIT-217ENST00000545913 LHFPL4Q7Z7J7 247 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 DNAJC30Q96LL9 226 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 GFRA4Q9GZZ7 299 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 LAMTOR3Q9UHA4 124 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 TRAV3A0A0B4J244 114 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 LINC00473A8K010 186 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 Q0VFX4 171 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 ZNF474Q6S9Z5 364 aaPredicted RBP9.54□□□□□ -0.88
CIT-217ENST00000545913 SAA4P35542 130 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 SRSF4Q08170 494 aaKnown RBP9.54□□□□□ -0.88
CIT-217ENST00000545913 TMEM155Q4W5P6 130 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 KLF17Q5JT82 389 aaPredicted RBP9.54□□□□□ -0.88
CIT-217ENST00000545913 LCNL1Q6ZST4 164 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 LSM4Q9Y4Z0 139 aaKnown RBP9.54□□□□□ -0.88
CIT-217ENST00000545913 FOXG1P55316 489 aaPredicted RBP9.54□□□□□ -0.88
CIT-217ENST00000545913 GUSBP1Q15486 140 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 C6orf226Q5I0X4 101 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 MESP1Q9BRJ9 268 aa9.54□□□□□ -0.88
CIT-217ENST00000545913 CLPSP04118 112 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 COLCA2A8K830 154 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 NDUFS8O00217 210 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 SLC25A16P16260 332 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 NTF4P34130 210 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 SS18Q15532 418 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 NPC2P61916 151 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 ASCL4Q6XD76 172 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 BCL6BQ8N143 479 aaPredicted RBP9.53□□□□□ -0.88
CIT-217ENST00000545913 QRFPP83859 136 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 CYTL1Q9NRR1 136 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 IGKV1D-17A0A075B6S4 117 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 BRD3OSQ6XYD6 125 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 CSPG4Q6UVK1 2322 aa9.53□□□□□ -0.88
CIT-217ENST00000545913 MYMXA0A1B0GTQ4 84 aa9.52□□□□□ -0.88
CIT-217ENST00000545913 TMEM75Q8N9X5 138 aa9.52□□□□□ -0.88
CIT-217ENST00000545913 SYS1-DBNDD2H3BUS1 97 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 Q8TAT8 98 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 SONP18583 2426 aaKnown RBP9.52□□□□□ -0.89
CIT-217ENST00000545913 C15orf62A8K5M9 175 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 F8WEM9 126 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 LYL1P12980 280 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 C1orf194Q5T5A4 169 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 C14orf178Q8N769 122 aaPredicted RBP9.52□□□□□ -0.89
CIT-217ENST00000545913 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 NDUFB8O95169 186 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 GNLYP22749 145 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 GAGE2BQ13066 116 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 GAGE2EQ4V326 116 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 GAGE2DQ9UEU5 116 aa9.52□□□□□ -0.89
CIT-217ENST00000545913 TRAV8-1A0A0A6YYK1 113 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms