RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 C20orf204Q6ZNR8 217 aa12.52□□□□□ -0.41
CHD4-210ENST00000544040 CABIN1Q9Y6J0 2220 aa12.52□□□□□ -0.41
CHD4-210ENST00000544040 NPSP0C0P6 89 aa12.51□□□□□ -0.41
CHD4-210ENST00000544040 TMEM105Q8N8V8 129 aa12.51□□□□□ -0.41
CHD4-210ENST00000544040 XCL2Q9UBD3 114 aa12.51□□□□□ -0.41
CHD4-210ENST00000544040 ZNF561-AS1K7EIQ3 104 aa12.51□□□□□ -0.41
CHD4-210ENST00000544040 EFNA4P52798 201 aa12.51□□□□□ -0.41
CHD4-210ENST00000544040 Q6ZRM9 215 aa12.51□□□□□ -0.41
CHD4-210ENST00000544040 MINOS1Q5TGZ0 78 aa12.51□□□□□ -0.41
CHD4-210ENST00000544040 CYYR1Q96J86 154 aa12.51□□□□□ -0.41
CHD4-210ENST00000544040 MINOS1-NBL1R4GNA1 71 aa12.51□□□□□ -0.41
CHD4-210ENST00000544040 IL18BPO95998 194 aa12.51□□□□□ -0.41
CHD4-210ENST00000544040 IGKV1D-17A0A075B6S4 117 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 SPINK13Q1W4C9 94 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 C9orf118A6NHY6 69 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 COL8A2P25067 703 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 SPACA3Q8IXA5 215 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 FAM223BA6NKX1 122 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 TRACP01848 142 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 FGF6P10767 208 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 IFITM1P13164 125 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 FAM223AQ8IWN6 122 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 LYPD1Q8N2G4 141 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 K7ERJ3 54 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 RUSC1-AS1Q66K80 236 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 C9JQL5 133 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 C18orf32Q8TCD1 76 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
CHD4-210ENST00000544040 TINCRA0A1B0GVN0 87 aa12.49□□□□□ -0.41
CHD4-210ENST00000544040 SRSF8Q9BRL6 282 aaKnown RBP12.49□□□□□ -0.41
CHD4-210ENST00000544040 GFRA4Q9GZZ7 299 aa12.49□□□□□ -0.41
CHD4-210ENST00000544040 POLR2AP24928 1970 aaKnown RBP12.49□□□□□ -0.41
CHD4-210ENST00000544040 C2orf66Q6UXQ4 117 aa12.49□□□□□ -0.41
CHD4-210ENST00000544040 TCTEX1D4Q5JR98 221 aa12.49□□□□□ -0.41
CHD4-210ENST00000544040 NKAPP1Q8N9T2 125 aa12.49□□□□□ -0.41
CHD4-210ENST00000544040 SHANK2-AS3Q9BTD1 123 aa12.49□□□□□ -0.41
CHD4-210ENST00000544040 ETDBQ3ZM63 59 aa12.49□□□□□ -0.41
CHD4-210ENST00000544040 CRLF1O75462 422 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 SCRT2Q9NQ03 307 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 COL4A5P29400 1685 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 F5H768 121 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 USMG5Q96IX5 58 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 IGLV3-19P01714 112 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 UBL5Q9BZL1 73 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 DOCK4Q8N1I0 1966 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 CFHR1Q03591 330 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 SLAQ13239 276 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 MPDZO75970 2070 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 LTBP4Q8N2S1 1624 aa12.48□□□□□ -0.41
CHD4-210ENST00000544040 IGHG3P01860 377 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 RNF5Q99942 180 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 A0A0G2JNJ9 132 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 MMP23AO75900 390 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 GAGE6Q13070 117 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 DAZ1Q9NQZ3 744 aaKnown RBP12.47□□□□□ -0.41
CHD4-210ENST00000544040 Q9UFV3 132 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 TRAV12-2A0A075B6T6 113 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 CEACAM8P31997 349 aaPredicted RBP12.47□□□□□ -0.41
CHD4-210ENST00000544040 Q0VG73 95 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 GNLYP22749 145 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 I3L3M4 83 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 INAFM2P0DMQ5 153 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 QRFPP83859 136 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 RNASE13Q5GAN3 156 aaKnown RBP12.47□□□□□ -0.41
CHD4-210ENST00000544040 PPDPFLQ8WWR9 84 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 C1QTNF4Q9BXJ3 329 aa12.47□□□□□ -0.41
CHD4-210ENST00000544040 PDCD11Q14690 1871 aaKnown RBP12.46□□□□□ -0.41
CHD4-210ENST00000544040 HS3ST6Q96QI5 342 aa12.46□□□□□ -0.41
CHD4-210ENST00000544040 A0A096LPF7 62 aa12.46□□□□□ -0.41
CHD4-210ENST00000544040 IGHV1-24A0A0C4DH33 117 aa12.46□□□□□ -0.41
CHD4-210ENST00000544040 WIPF3A6NGB9 483 aa12.46□□□□□ -0.41
CHD4-210ENST00000544040 SAA4P35542 130 aa12.46□□□□□ -0.41
CHD4-210ENST00000544040 Q0VFX4 171 aa12.46□□□□□ -0.41
CHD4-210ENST00000544040 CHD5Q8TDI0 1954 aa12.46□□□□□ -0.41
CHD4-210ENST00000544040 B4DSR2 109 aa12.46□□□□□ -0.41
CHD4-210ENST00000544040 ZFP36L1Q07352 338 aaKnown RBP12.46□□□□□ -0.41
CHD4-210ENST00000544040 Q8N8P6 123 aa12.46□□□□□ -0.41
CHD4-210ENST00000544040 TMEM141Q96I45 108 aa12.46□□□□□ -0.41
CHD4-210ENST00000544040 TRBV25-1A0A075B6N4 114 aa12.46□□□□□ -0.42
CHD4-210ENST00000544040 A0A1W2PPI3 338 aa12.46□□□□□ -0.42
CHD4-210ENST00000544040 M0R1W7 72 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
CHD4-210ENST00000544040 Q6ZWC4 215 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 hADV29S1A0JD25 119 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 AZU1P20160 251 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 DSCR9P59020 149 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 THAP8Q8NA92 274 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 PRSS46E5RG02 174 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 PATJQ8NI35 1801 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 MST1LQ2TV78 715 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 FAM104BQ5XKR9 115 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 CARD19Q96LW7 228 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 K7EP13 123 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 NDUFS5O43920 106 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 DSCR8Q96T75 97 aa12.45□□□□□ -0.42
CHD4-210ENST00000544040 PRB2P02812 416 aaPredicted RBP12.45□□□□□ -0.42
CHD4-210ENST00000544040 K7EP34 96 aa12.44□□□□□ -0.42
CHD4-210ENST00000544040 PFN1P07737 140 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms