RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 H3BUX3 64 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 FRMD6-AS1P0C7T7 363 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 MRPL54Q6P161 138 aaKnown RBP13.28□□□□□ -0.28
PTPRO-209ENST00000543886 CLEC19AQ6UXS0 136 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 TMEM75Q8N9X5 138 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 ZNF492Q9P255 531 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 NAT8BQ9UHF3 227 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 SOX21Q9Y651 276 aaPredicted RBP13.28□□□□□ -0.28
PTPRO-209ENST00000543886 SPG11Q96JI7 2443 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 TRBV6-1A0A0K0K1D8 114 aa13.27□□□□□ -0.28
PTPRO-209ENST00000543886 TSKUQ8WUA8 353 aa13.27□□□□□ -0.28
PTPRO-209ENST00000543886 DAZAP1Q96EP5 407 aaKnown RBP13.27□□□□□ -0.28
PTPRO-209ENST00000543886 CCDC140Q96MF4 163 aa13.27□□□□□ -0.28
PTPRO-209ENST00000543886 RPP21Q9H633 154 aaKnown RBP13.27□□□□□ -0.28
PTPRO-209ENST00000543886 SVEP1Q4LDE5 3571 aa13.27□□□□□ -0.29
PTPRO-209ENST00000543886 IGLV2-11P01706 119 aa13.27□□□□□ -0.29
PTPRO-209ENST00000543886 P01737 135 aa13.27□□□□□ -0.29
PTPRO-209ENST00000543886 CRIP2P52943 208 aaPredicted RBP13.27□□□□□ -0.29
PTPRO-209ENST00000543886 PSG9Q00887 426 aa13.27□□□□□ -0.29
PTPRO-209ENST00000543886 ATP5G2Q06055 141 aa13.27□□□□□ -0.29
PTPRO-209ENST00000543886 TOMM20LQ6UXN7 152 aa13.27□□□□□ -0.29
PTPRO-209ENST00000543886 VPS13CQ709C8 3753 aa13.27□□□□□ -0.29
PTPRO-209ENST00000543886 FAM208BQ5VWN6 2430 aa13.26□□□□□ -0.29
PTPRO-209ENST00000543886 IGHV3OR16-8A0A075B7F1 116 aa13.26□□□□□ -0.29
PTPRO-209ENST00000543886 A6NDX4 124 aa13.26□□□□□ -0.29
PTPRO-209ENST00000543886 TMEM136Q6ZRR5 245 aa13.26□□□□□ -0.29
PTPRO-209ENST00000543886 LINC01356Q8N9X3 169 aa13.26□□□□□ -0.29
PTPRO-209ENST00000543886 ZNF331Q9NQX6 463 aaPredicted RBP13.26□□□□□ -0.29
PTPRO-209ENST00000543886 FAM223BA6NKX1 122 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 DIRC3C9JPN6 131 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 M0QZK8 103 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 CSN1S1P47710 185 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 C19orf54Q5BKX5 351 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 FAM223AQ8IWN6 122 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 LINC00527Q9UJ94 153 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 HLA-DQA1P01909 254 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 CRISP2P16562 243 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 NUTF2P61970 127 aaKnown RBP13.25□□□□□ -0.29
PTPRO-209ENST00000543886 LINC00322Q6ZN03 302 aaPredicted RBP13.25□□□□□ -0.29
PTPRO-209ENST00000543886 CIARTQ8N365 385 aaPredicted RBP13.25□□□□□ -0.29
PTPRO-209ENST00000543886 NUP35Q8NFH5 326 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 NEU1Q99519 415 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 ZFAND3Q9H8U3 227 aa13.25□□□□□ -0.29
PTPRO-209ENST00000543886 GRIFINA4D1Z8 144 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 C19orf71A6NCJ1 209 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 HIGD1CA8MV81 97 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 M0R3E3 92 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 SCGB1D1O95968 90 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 AVPP01185 164 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 RAB9AP51151 201 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 PSG3Q16557 428 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 CT83Q5H943 113 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 RASL11AQ6T310 242 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 PRSS22Q9GZN4 317 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 ZFP30Q9Y2G7 519 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 A8MWL6 223 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 TCAPO15273 167 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 TRGV3P03979 118 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 RELQ04864 619 aaPredicted RBP13.24□□□□□ -0.29
PTPRO-209ENST00000543886 PSG8Q9UQ74 426 aa13.24□□□□□ -0.29
PTPRO-209ENST00000543886 SERTM2A0A1B0GWG4 89 aa13.23□□□□□ -0.29
PTPRO-209ENST00000543886 IGF1P05019 195 aa13.23□□□□□ -0.29
PTPRO-209ENST00000543886 COL8A1P27658 744 aa13.23□□□□□ -0.29
PTPRO-209ENST00000543886 ZNF124Q15973 351 aa13.23□□□□□ -0.29
PTPRO-209ENST00000543886 C1orf194Q5T5A4 169 aa13.23□□□□□ -0.29
PTPRO-209ENST00000543886 WIPF2Q8TF74 440 aaPredicted RBP13.23□□□□□ -0.29
PTPRO-209ENST00000543886 A0A1B0GUS0 222 aa13.22□□□□□ -0.29
PTPRO-209ENST00000543886 ATP6V0BQ99437 205 aa13.22□□□□□ -0.29
PTPRO-209ENST00000543886 NAGKQ9UJ70 344 aa13.22□□□□□ -0.29
PTPRO-209ENST00000543886 ZNF253O75346 499 aa13.22□□□□□ -0.29
PTPRO-209ENST00000543886 IGHG2P01859 326 aa13.22□□□□□ -0.29
PTPRO-209ENST00000543886 TMEM256Q8N2U0 113 aa13.22□□□□□ -0.29
PTPRO-209ENST00000543886 SMAD5-AS1Q9Y6J3 95 aa13.22□□□□□ -0.29
PTPRO-209ENST00000543886 A0A096LNT2 108 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 KIR2DL5BA0A0G2JN68 375 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 KIR2DL5BA0A0G2JPC4 375 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 J3QLI3 93 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 M0R143 59 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 EREGO14944 169 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 APCSP02743 223 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 PRB4P10163 310 aaPredicted RBP13.21□□□□□ -0.29
PTPRO-209ENST00000543886 TPPP2P59282 170 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 ATP5L2Q7Z4Y8 100 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 KIR2DL5AQ8N109 375 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.29
PTPRO-209ENST00000543886 CELSR2Q9HCU4 2923 aa13.21□□□□□ -0.3
PTPRO-209ENST00000543886 ZNF785A8K8V0 405 aa13.2□□□□□ -0.3
PTPRO-209ENST00000543886 TCF24Q7RTU0 167 aa13.2□□□□□ -0.3
PTPRO-209ENST00000543886 BAGE3Q86Y29 109 aa13.2□□□□□ -0.3
PTPRO-209ENST00000543886 ZC2HC1AQ96GY0 325 aa13.2□□□□□ -0.3
PTPRO-209ENST00000543886 METTL26Q96S19 204 aa13.2□□□□□ -0.3
PTPRO-209ENST00000543886 GFRA4Q9GZZ7 299 aa13.2□□□□□ -0.3
PTPRO-209ENST00000543886 MAP1AP78559 2803 aaPredicted RBP13.2□□□□□ -0.3
PTPRO-209ENST00000543886 CSMD1Q96PZ7 3565 aa13.2□□□□□ -0.3
PTPRO-209ENST00000543886 NPIPB6E9PJ23 425 aa13.2□□□□□ -0.3
PTPRO-209ENST00000543886 BUB3O43684 328 aa13.2□□□□□ -0.3
PTPRO-209ENST00000543886 ARL6IP6Q8N6S5 226 aa13.2□□□□□ -0.3
PTPRO-209ENST00000543886 CENPEQ02224 2701 aa13.19□□□□□ -0.3
PTPRO-209ENST00000543886 CLPSL1A2RUU4 121 aa13.19□□□□□ -0.3
PTPRO-209ENST00000543886 H3BUA1 57 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms