RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 IGKV1-9A0A0C4DH69 117 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 PMS2P5A8MQ11 134 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 A8MWL6 223 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 P04436 131 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 ARL14EPLP0DKL9 152 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 MFAP2P55001 183 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 SEC61BP60468 96 aaKnown RBP4.58□□□□□ -1.68
XRCC4-206ENST00000542685 TMEM258P61165 79 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 RPS18P62269 152 aaKnown RBP4.58□□□□□ -1.68
XRCC4-206ENST00000542685 KLF17Q5JT82 389 aaPredicted RBP4.58□□□□□ -1.68
XRCC4-206ENST00000542685 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.58□□□□□ -1.68
XRCC4-206ENST00000542685 C10orf128Q5T292 105 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 TEX36Q5VZQ5 186 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 SSX8Q7RTT4 187 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 C6orf201Q7Z4U5 140 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 KIR3DL3Q8N743 410 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 WDR31Q8NA23 367 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 TMEM158Q8WZ71 300 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 LINC00526Q96FQ7 95 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 ZC2HC1AQ96GY0 325 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 HSD17B10Q99714 261 aaKnown RBP4.58□□□□□ -1.68
XRCC4-206ENST00000542685 CACNG5Q9UF02 275 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 SRCAPQ6ZRS2 3230 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 GTF3C1Q12789 2109 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 KIAA1549Q9HCM3 1950 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 LOC101059948A0A1B0GTJ6 334 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 H3BP45 60 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 PGLYRP1O75594 196 aaPredicted RBP4.57□□□□□ -1.68
XRCC4-206ENST00000542685 WISP2O76076 250 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 IL4P05112 153 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 SCGB1C2P0DMR2 95 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 RPL7P18124 248 aaKnown RBP4.57□□□□□ -1.68
XRCC4-206ENST00000542685 INSL3P51460 131 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 FXYD2P54710 66 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 SEC61GP60059 68 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 HSPE1P61604 102 aaKnown RBP4.57□□□□□ -1.68
XRCC4-206ENST00000542685 NNATQ16517 81 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 C12orf74Q32Q52 190 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 SPANXN5Q5MJ07 72 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 GFRALQ6UXV0 394 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 ZNF818PQ6ZRF7 136 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 C3orf22Q8N5N4 141 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 OR1L4Q8NGR5 311 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 SLC37A2Q8TED4 501 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 BAALCQ8WXS3 180 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 IGF2BP2-AS1Q96M15 143 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 KIR2DL4Q99706 377 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 NAA38Q9BRA0 125 aaKnown RBP4.57□□□□□ -1.68
XRCC4-206ENST00000542685 PRORYQ9H606 182 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 NHP2Q9NX24 153 aaKnown RBP4.57□□□□□ -1.68
XRCC4-206ENST00000542685 TCF19Q9Y242 345 aa4.57□□□□□ -1.68
XRCC4-206ENST00000542685 LSM4Q9Y4Z0 139 aaKnown RBP4.57□□□□□ -1.68
XRCC4-206ENST00000542685 IGKV1D-43A0A0B4J1Z2 117 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 C15orf62A8K5M9 175 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 IGLV3-19P01714 112 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 LINC00694P0DN24 101 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 IAPPP10997 89 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 SPTBP11277 2137 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 CD27P26842 260 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 CNTFRP26992 372 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 RPL13AP40429 203 aaKnown RBP4.56□□□□□ -1.68
XRCC4-206ENST00000542685 NMUP48645 174 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 DSCR4P56555 118 aaPredicted RBP4.56□□□□□ -1.68
XRCC4-206ENST00000542685 FBXW4P57775 412 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 LINC01547P58512 204 aaPredicted RBP4.56□□□□□ -1.68
XRCC4-206ENST00000542685 C9orf153Q5TBE3 101 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 LINC00596Q86U02 117 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 NFE4Q86UQ8 179 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 PDPNQ86YL7 162 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 C8orf31Q8N9H6 132 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 TMEM116Q8NCL8 245 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 OR4C13Q8NGP0 309 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 CCL4L1Q8NHW4 92 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 FLYWCH2Q96CP2 140 aaKnown RBP4.56□□□□□ -1.68
XRCC4-206ENST00000542685 ZNF492Q9P255 531 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 TP73-AS1Q9UF72 201 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 CHCHD2Q9Y6H1 151 aaPredicted RBP4.56□□□□□ -1.68
XRCC4-206ENST00000542685 GOLGB1Q14789 3259 aaKnown RBP4.56□□□□□ -1.68
XRCC4-206ENST00000542685 HCFC1P51610 2035 aa4.56□□□□□ -1.68
XRCC4-206ENST00000542685 LOC102723996A0A087X1L8 192 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 TRAV24A0A0B4J272 114 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 SPTY2D1-AS1A0A0U1RR47 76 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 ZNF816-ZNF321PA0A0X1KG74 233 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 IGLV2-8P01709 118 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 APOHP02749 345 aaPredicted RBP4.55□□□□□ -1.68
XRCC4-206ENST00000542685 FRMD6-AS1P0C7T7 363 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 CECR9P0C854 216 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 CRYGAP11844 174 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 UBE2D3P61077 147 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 UBE2D2P62837 147 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 C3AR1Q16581 482 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 ACP7Q6ZNF0 438 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 C17orf82Q86X59 251 aaPredicted RBP4.55□□□□□ -1.68
XRCC4-206ENST00000542685 SLC22A18ASQ8N1D0 253 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 Q8N7P7 452 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 TSACCQ96A04 125 aaPredicted RBP4.55□□□□□ -1.68
XRCC4-206ENST00000542685 MMABQ96EY8 250 aaPredicted RBP4.55□□□□□ -1.68
XRCC4-206ENST00000542685 ZNF414Q96IQ9 312 aa4.55□□□□□ -1.68
XRCC4-206ENST00000542685 CARD19Q96LW7 228 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms