RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 TRGC1P0CF51 173 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 TPT1P13693 172 aaKnown RBP2.03□□□□□ -2.08
LEMD3-204ENST00000542032 NFYAP23511 347 aaPredicted RBP2.03□□□□□ -2.08
LEMD3-204ENST00000542032 TPPP2P59282 170 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 LSM3P62310 102 aaKnown RBP2.03□□□□□ -2.08
LEMD3-204ENST00000542032 CDK6Q00534 326 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 HSD52Q0P140 79 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 FOXF1Q12946 379 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 CDK5R1Q15078 307 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 PATE2Q6UY27 113 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 FAM216BQ8N7L0 139 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 SFT2D1Q8WV19 159 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 DIRC1Q969H9 104 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 PKMYT1Q99640 499 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 ZNF443Q9Y2A4 671 aaPredicted RBP2.03□□□□□ -2.08
LEMD3-204ENST00000542032 TIMM9Q9Y5J7 89 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 DNAJC15Q9Y5T4 150 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 MPC1Q9Y5U8 109 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 MYH9P35579 1960 aaKnown RBP2.03□□□□□ -2.08
LEMD3-204ENST00000542032 TANC2Q9HCD6 1990 aa2.03□□□□□ -2.08
LEMD3-204ENST00000542032 COL27A1Q8IZC6 1860 aaPredicted RBP2.03□□□□□ -2.09
LEMD3-204ENST00000542032 WDR97A6NE52 1622 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 TCOF1Q13428 1488 aaKnown RBP2.02□□□□□ -2.09
LEMD3-204ENST00000542032 BCL9LQ86UU0 1499 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 PPIP5K1Q6PFW1 1433 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 HEATR5AQ86XA9 2040 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 ZFC3H1O60293 1989 aaKnown RBP2.02□□□□□ -2.09
LEMD3-204ENST00000542032 SCN9AQ15858 1988 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 THADAQ6YHU6 1953 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 PTPRSQ13332 1948 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 IGLV4-69A0A075B6H9 119 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 IGLV3-9A0A075B6K5 115 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 FNDC10F2Z333 226 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 SDCBPO00560 298 aaPredicted RBP2.02□□□□□ -2.09
LEMD3-204ENST00000542032 SYNGR2O43760 224 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 CISD3P0C7P0 127 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 HIST1H1BP16401 226 aaKnown RBP2.02□□□□□ -2.09
LEMD3-204ENST00000542032 HIST1H1DP16402 221 aaKnown RBP2.02□□□□□ -2.09
LEMD3-204ENST00000542032 BTG2P78543 158 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 MRPS36P82909 103 aaKnown RBP2.02□□□□□ -2.09
LEMD3-204ENST00000542032 KLRD1Q13241 179 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 CLLU1Q5K131 121 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 GKN2Q86XP6 184 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 ATOH7Q8N100 152 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 DYNAPQ8N1N2 210 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 ST20-AS1Q8NBB2 130 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 Q8NDZ9 215 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 UBALD1Q8TB05 177 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 AQP3Q92482 292 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 CHCHD1Q96BP2 118 aaKnown RBP2.02□□□□□ -2.09
LEMD3-204ENST00000542032 SNRNP25Q9BV90 132 aaKnown RBP2.02□□□□□ -2.09
LEMD3-204ENST00000542032 BCL2L10Q9HD36 194 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 FAIMQ9NVQ4 179 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 FKBP11Q9NYL4 201 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 SBF1O95248 1867 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 MYO5AQ9Y4I1 1855 aaKnown RBP2.02□□□□□ -2.09
LEMD3-204ENST00000542032 NUP98P52948 1817 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 CABIN1Q9Y6J0 2220 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 RIMBP3CA6NJZ7 1639 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 RIMBP3BA6NNM3 1639 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 RIMBP3Q9UFD9 1639 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 KDM5CP41229 1560 aa2.02□□□□□ -2.09
LEMD3-204ENST00000542032 DLC1Q96QB1 1528 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 CITO14578 2027 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 NCAPD3P42695 1498 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 ARHGEF28Q8N1W1 1705 aaKnown RBP2.01□□□□□ -2.09
LEMD3-204ENST00000542032 TRAV7A0A075B6U4 112 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 TMEM235A6NFC5 223 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 C16orf90A8MZG2 172 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 TIMM17BO60830 172 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 CD14P08571 375 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 CRYGAP11844 174 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 SLC25A4P12235 298 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 DEFA4P12838 97 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 S100A10P60903 97 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 TMEM258P61165 79 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 BLCAPP62952 87 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 COL5A1-AS1Q5SY13 56 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 KLF14Q8TD94 323 aaPredicted RBP2.01□□□□□ -2.09
LEMD3-204ENST00000542032 MRPS24Q96EL2 167 aaKnown RBP2.01□□□□□ -2.09
LEMD3-204ENST00000542032 SPANXDQ9BXN6 97 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 SAR1AQ9NR31 198 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 LSM2Q9Y333 95 aaKnown RBP2.01□□□□□ -2.09
LEMD3-204ENST00000542032 FAM215AQ9Y5M1 114 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 IER3IP1Q9Y5U9 82 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 MYH13Q9UKX3 1938 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 NYNRINQ9P2P1 1898 aaKnown RBP2.01□□□□□ -2.09
LEMD3-204ENST00000542032 CECR2Q9BXF3 1484 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 SCN4AP35499 1836 aa2.01□□□□□ -2.09
LEMD3-204ENST00000542032 RGS12O14924 1447 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 PIK3C2AO00443 1686 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 LCTP09848 1927 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 ATG2AQ2TAZ0 1938 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 GREB1Q4ZG55 1949 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 TRBV20-1A0A075B6N2 111 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 TRAV12-2A0A075B6T6 113 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 TRGV5A0A0B4J1U4 118 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 C7orf66A4D0T2 115 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 C11orf86A6NJI1 115 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 H7C2G1 150 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms