RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 SOCS3O14543 225 aa8.21□□□□□ -1.1
TRERF1-205ENST00000541110 UBE2E1P51965 193 aa8.21□□□□□ -1.1
TRERF1-205ENST00000541110 IGHV4-4A0A075B6R2 117 aa8.21□□□□□ -1.1
TRERF1-205ENST00000541110 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
TRERF1-205ENST00000541110 PRSS23O95084 383 aa8.21□□□□□ -1.1
TRERF1-205ENST00000541110 EGR2P11161 476 aaPredicted RBP8.21□□□□□ -1.1
TRERF1-205ENST00000541110 ZNF503Q96F45 646 aa8.21□□□□□ -1.1
TRERF1-205ENST00000541110 SIPA1L3O60292 1781 aaPredicted RBP8.2□□□□□ -1.1
TRERF1-205ENST00000541110 PRB2P02812 416 aaPredicted RBP8.2□□□□□ -1.1
TRERF1-205ENST00000541110 C5orf64Q2M2E5 130 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 PSG3Q16557 428 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 IL18BPO95998 194 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 SMKR1H3BMG3 65 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 C1QTNF9P0C862 333 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 GATA3P23771 443 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 C10orf55Q5SWW7 151 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 TMEM243Q9BU79 118 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 LIME1Q9H400 295 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 OVOL3O00110 214 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 TRPT1Q86TN4 253 aaKnown RBP8.2□□□□□ -1.1
TRERF1-205ENST00000541110 C1QL4Q86Z23 238 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 ZNF98A6NK75 572 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 IGKV1-39P01597 117 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 IGKV1D-39P04432 117 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 CD59P13987 128 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 CR1LQ2VPA4 569 aa8.2□□□□□ -1.1
TRERF1-205ENST00000541110 TRAV9-1A0A075B6T8 112 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 SLC25A48Q6ZT89 311 aaKnown RBP8.19□□□□□ -1.1
TRERF1-205ENST00000541110 C9orf139Q6ZV77 190 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 BAALCQ8WXS3 180 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 WBP1Q96G27 269 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 PKIGQ9Y2B9 76 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 BUB3O43684 328 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 SELLP14151 372 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 NOTCH3Q9UM47 2321 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 TRAV12-2A0A075B6T6 113 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 LY6G5BQ8NDX9 201 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 AMBPP02760 352 aa8.19□□□□□ -1.1
TRERF1-205ENST00000541110 FOXG1P55316 489 aaPredicted RBP8.19□□□□□ -1.1
TRERF1-205ENST00000541110 NDUFS8O00217 210 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 LMO1P25800 156 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 TNCP24821 2201 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 ATP6V0BQ99437 205 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 RTBDNQ9BSG5 229 aaPredicted RBP8.18□□□□□ -1.1
TRERF1-205ENST00000541110 A6NNC1 897 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 TMEM158Q8WZ71 300 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 C18orf12Q96KH6 178 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 NPDC1Q9NQX5 325 aaPredicted RBP8.18□□□□□ -1.1
TRERF1-205ENST00000541110 IGHG4P01861 327 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 Q6ZQT7 251 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 TSKUQ8WUA8 353 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 FBLIM1Q8WUP2 373 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 CTHRC1Q96CG8 243 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 CHAC1Q9BUX1 264 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 GNB1LQ9BYB4 327 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 NMBP08949 121 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 TIRAPP58753 221 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 ZNRF2Q8NHG8 242 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 NAA38Q9BRA0 125 aaKnown RBP8.18□□□□□ -1.1
TRERF1-205ENST00000541110 RLFQ13129 1914 aa8.18□□□□□ -1.1
TRERF1-205ENST00000541110 COL5A3P25940 1745 aaPredicted RBP8.18□□□□□ -1.1
TRERF1-205ENST00000541110 PIN1P1O15428 100 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 OCC1Q8TAD7 63 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 IGKV1D-13A0A0B4J2D9 117 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 C9JAW5 83 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 ERVH48-1M5A8F1 160 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 IGKV1-13P0DP09 117 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 IFITM2Q01629 132 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 LYPD2Q6UXB3 125 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 FNDC1Q4ZHG4 1894 aaPredicted RBP8.17□□□□□ -1.1
TRERF1-205ENST00000541110 TRBV6-7A0A0A0MS04 114 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 IGHV4-28A0A0C4DH34 117 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 A0A1B0GWJ7 208 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 C9orf153Q5TBE3 101 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 TMEM170AQ8WVE7 144 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 GZMMP51124 257 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 HSD52Q0P140 79 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 LAMTOR2Q9Y2Q5 125 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 XCL1P47992 114 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 UBL5Q9BZL1 73 aa8.17□□□□□ -1.1
TRERF1-205ENST00000541110 SRP19P09132 144 aaKnown RBP8.16□□□□□ -1.1
TRERF1-205ENST00000541110 RBM38Q9H0Z9 239 aaKnown RBP8.16□□□□□ -1.1
TRERF1-205ENST00000541110 BCL6BQ8N143 479 aaPredicted RBP8.16□□□□□ -1.1
TRERF1-205ENST00000541110 PPP1R3EQ9H7J1 279 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 SMPXQ9UHP9 88 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 OOSP1A8MZH6 123 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 CCL18P55774 89 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 TRGV9Q99603 122 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 OSTCQ9NRP0 149 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 TSSC4Q9Y5U2 329 aaPredicted RBP8.16□□□□□ -1.1
TRERF1-205ENST00000541110 ACACAQ13085 2346 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 ARHGAP21Q5T5U3 1957 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 I3L3M4 83 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 SEC61GP60059 68 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 PLSCR4Q9NRQ2 329 aa8.16□□□□□ -1.1
TRERF1-205ENST00000541110 A0A1W2PRE2 83 aa8.15□□□□□ -1.1
TRERF1-205ENST00000541110 F8W735 103 aaPredicted RBP8.15□□□□□ -1.1
TRERF1-205ENST00000541110 PRR30Q53SZ7 412 aaPredicted RBP8.15□□□□□ -1.1
TRERF1-205ENST00000541110 TRBV5-3A0A0A0MS03 114 aa8.15□□□□□ -1.1
TRERF1-205ENST00000541110 H0YJW9 148 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms