RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 YLPM1P49750 1951 aaKnown RBP11.76□□□□□ -0.53
CACNB1-206ENST00000539338 TRAV2A0A0B4J234 112 aa11.76□□□□□ -0.53
CACNB1-206ENST00000539338 HTN3P15516 51 aa11.76□□□□□ -0.53
CACNB1-206ENST00000539338 LAGE3Q14657 143 aa11.76□□□□□ -0.53
CACNB1-206ENST00000539338 DUX4L9Q6RFH8 374 aaPredicted RBP11.76□□□□□ -0.53
CACNB1-206ENST00000539338 NOTCH4Q99466 2003 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 ZNF726P1Q15940 193 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 TMEM155Q4W5P6 130 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 E7EQL1 145 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 MINOS1Q5TGZ0 78 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 MINOS1-NBL1R4GNA1 71 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 SMKR1H3BMG3 65 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 NDUFS6O75380 124 aaKnown RBP11.75□□□□□ -0.53
CACNB1-206ENST00000539338 CD28P10747 220 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 LMO1P25800 156 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 CNTFRP26992 372 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 SLX1AQ9BQ83 275 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 MS4A6AQ9H2W1 248 aa11.75□□□□□ -0.53
CACNB1-206ENST00000539338 ZFHX2Q9C0A1 2572 aaPredicted RBP11.75□□□□□ -0.53
CACNB1-206ENST00000539338 H3BUX3 64 aa11.74□□□□□ -0.53
CACNB1-206ENST00000539338 GUSBP1Q15486 140 aa11.74□□□□□ -0.53
CACNB1-206ENST00000539338 CYYR1Q96J86 154 aa11.74□□□□□ -0.53
CACNB1-206ENST00000539338 IGHV4-39P01824 125 aa11.74□□□□□ -0.53
CACNB1-206ENST00000539338 HSD52Q0P140 79 aa11.74□□□□□ -0.53
CACNB1-206ENST00000539338 PIEZO1Q92508 2521 aa11.74□□□□□ -0.53
CACNB1-206ENST00000539338 OR2K2Q8NGT1 345 aa11.74□□□□□ -0.53
CACNB1-206ENST00000539338 A0A0U1RRA0 63 aa11.74□□□□□ -0.53
CACNB1-206ENST00000539338 HOXA3O43365 443 aaPredicted RBP11.74□□□□□ -0.53
CACNB1-206ENST00000539338 IL17DQ8TAD2 202 aa11.74□□□□□ -0.53
CACNB1-206ENST00000539338 LSM4Q9Y4Z0 139 aaKnown RBP11.74□□□□□ -0.53
CACNB1-206ENST00000539338 A0A087X0K7 114 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 TOMM40O96008 361 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 SRRM4A7MD48 611 aaKnown RBP11.73□□□□□ -0.53
CACNB1-206ENST00000539338 ZNF688P0C7X2 276 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 ERVK11-1P61568 191 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 AMN1Q8IY45 258 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 TRBV7-9A0A0J9YWB2 115 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 Q86TA4 180 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 IGHV3-73A0A0B4J1V6 119 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 M0R1W7 72 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
CACNB1-206ENST00000539338 TMEM14BQ9NUH8 114 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 DOCK11Q5JSL3 2073 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 FNDC10F2Z333 226 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 SYS1-DBNDD2H3BUS1 97 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 ZNF479Q96JC4 524 aa11.73□□□□□ -0.53
CACNB1-206ENST00000539338 TRAV12-3A0A0B4J271 114 aa11.72□□□□□ -0.53
CACNB1-206ENST00000539338 SEC11AP67812 179 aa11.72□□□□□ -0.53
CACNB1-206ENST00000539338 MPV17L2Q567V2 206 aa11.72□□□□□ -0.53
CACNB1-206ENST00000539338 TMEM249Q2WGJ8 235 aa11.72□□□□□ -0.53
CACNB1-206ENST00000539338 MRPL27Q9P0M9 148 aaKnown RBP11.72□□□□□ -0.53
CACNB1-206ENST00000539338 PCNX1Q96RV3 2341 aa11.72□□□□□ -0.53
CACNB1-206ENST00000539338 DOCK10Q96BY6 2186 aa11.72□□□□□ -0.53
CACNB1-206ENST00000539338 TRGV11A0A075B6L2 103 aa11.72□□□□□ -0.53
CACNB1-206ENST00000539338 ZNF124Q15973 351 aa11.72□□□□□ -0.53
CACNB1-206ENST00000539338 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.72□□□□□ -0.53
CACNB1-206ENST00000539338 SAMD5Q5TGI4 173 aa11.72□□□□□ -0.53
CACNB1-206ENST00000539338 RIPPLY3P57055 190 aa11.71□□□□□ -0.53
CACNB1-206ENST00000539338 ERCC8Q13216 396 aa11.71□□□□□ -0.53
CACNB1-206ENST00000539338 DTX2Q86UW9 622 aa11.71□□□□□ -0.53
CACNB1-206ENST00000539338 FCN3O75636 299 aa11.71□□□□□ -0.53
CACNB1-206ENST00000539338 CEACAM8P31997 349 aaPredicted RBP11.71□□□□□ -0.53
CACNB1-206ENST00000539338 C10orf126Q8N4M7 172 aa11.71□□□□□ -0.53
CACNB1-206ENST00000539338 RNF182Q8N6D2 247 aa11.71□□□□□ -0.53
CACNB1-206ENST00000539338 TRAV8-2A0A0B4J237 113 aa11.71□□□□□ -0.54
CACNB1-206ENST00000539338 ITGB1BP1O14713 200 aa11.71□□□□□ -0.54
CACNB1-206ENST00000539338 BEND2Q8NDZ0 799 aa11.71□□□□□ -0.54
CACNB1-206ENST00000539338 ARMS2P0C7Q2 107 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 C3orf36Q3SXR2 165 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 BCL6BQ8N143 479 aaPredicted RBP11.7□□□□□ -0.54
CACNB1-206ENST00000539338 C14orf178Q8N769 122 aaPredicted RBP11.7□□□□□ -0.54
CACNB1-206ENST00000539338 SHANK2-AS3Q9BTD1 123 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 C17orf58Q2M2W7 97 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 C9orf139Q6ZV77 190 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 LYPD1Q8N2G4 141 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 OR9G4Q8NGQ1 327 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 SMPXQ9UHP9 88 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 TRBV7-1A0A0A6YYK4 115 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 OR5A1Q8NGJ0 315 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 DLEU1O43261 78 aa11.7□□□□□ -0.54
CACNB1-206ENST00000539338 SAA4P35542 130 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 HAPLN4Q86UW8 402 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 MAPK1IP1LQ8NDC0 245 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 NDUFA4L2Q9NRX3 87 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 A0A1B0GV72 72 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 TMEM95Q3KNT9 176 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 LRRC75A-AS1Q8N1F1 130 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 PAX2Q02962 417 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 DAZAP2Q15038 168 aaPredicted RBP11.69□□□□□ -0.54
CACNB1-206ENST00000539338 ZNF876PQ49A33 203 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 KLHL30-AS1Q8NEE0 82 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 SLC25A2Q9BXI2 301 aa11.69□□□□□ -0.54
CACNB1-206ENST00000539338 TRGV4A0A0C4DH28 118 aa11.68□□□□□ -0.54
CACNB1-206ENST00000539338 TANC1Q9C0D5 1861 aa11.68□□□□□ -0.54
CACNB1-206ENST00000539338 IGLV3-1P01715 115 aa11.68□□□□□ -0.54
CACNB1-206ENST00000539338 PRTN3P24158 256 aa11.68□□□□□ -0.54
CACNB1-206ENST00000539338 ZNF134P52741 427 aa11.68□□□□□ -0.54
CACNB1-206ENST00000539338 CFAP161Q6P656 301 aa11.68□□□□□ -0.54
CACNB1-206ENST00000539338 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
CACNB1-206ENST00000539338 NPC2P61916 151 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms