RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 IGHV3OR16-8A0A075B7F1 116 aa15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 TRGV3P03979 118 aa15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 LOXL1Q08397 574 aaPredicted RBP15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 PSG3Q16557 428 aa15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 CT83Q5H943 113 aa15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 DAZAP1Q96EP5 407 aaKnown RBP15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 PSG8Q9UQ74 426 aa15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 M0R3E3 92 aa15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 ZNF253O75346 499 aa15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 P01737 135 aa15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 COL8A1P27658 744 aa15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 CSN1S1P47710 185 aa15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 KRTAP10-9P60411 292 aa15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 RELQ04864 619 aaPredicted RBP15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 CIARTQ8N365 385 aaPredicted RBP15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 NUP35Q8NFH5 326 aa15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 PACRGQ96M98 296 aaPredicted RBP15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 NIT2Q9NQR4 276 aa15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 ZNF331Q9NQX6 463 aaPredicted RBP15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 ZFP30Q9Y2G7 519 aa15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 SMAD5-AS1Q9Y6J3 95 aa15.97■□□□□ 0.15
SMPDL3A-203ENST00000539041 SERTM2A0A1B0GWG4 89 aa15.96■□□□□ 0.15
SMPDL3A-203ENST00000539041 H3BUA1 57 aa15.96■□□□□ 0.15
SMPDL3A-203ENST00000539041 BRI3O95415 125 aa15.96■□□□□ 0.15
SMPDL3A-203ENST00000539041 RASL11AQ6T310 242 aa15.96■□□□□ 0.15
SMPDL3A-203ENST00000539041 ARL6IP6Q8N6S5 226 aa15.96■□□□□ 0.15
SMPDL3A-203ENST00000539041 NEU1Q99519 415 aa15.96■□□□□ 0.15
SMPDL3A-203ENST00000539041 HLA-DQA1P01909 254 aa15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 AMBPP02760 352 aa15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 PYY3Q5JQD4 70 aa15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 GBGT1Q8N5D6 347 aa15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 WIPF2Q8TF74 440 aaPredicted RBP15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 UTP20O75691 2785 aaKnown RBP15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 A8MWL6 223 aa15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 TGFAP01135 160 aa15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 PPIFP30405 207 aaKnown RBP15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 RAB4BP61018 213 aa15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 LRRC75A-AS1Q8N1F1 130 aa15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 OR4B1Q8NGF8 309 aa15.95■□□□□ 0.14
SMPDL3A-203ENST00000539041 FAM208BQ5VWN6 2430 aa15.94■□□□□ 0.14
SMPDL3A-203ENST00000539041 A0A087X0K7 114 aa15.94■□□□□ 0.14
SMPDL3A-203ENST00000539041 CLPSL1A2RUU4 121 aa15.94■□□□□ 0.14
SMPDL3A-203ENST00000539041 BUB3O43684 328 aa15.94■□□□□ 0.14
SMPDL3A-203ENST00000539041 TPPP2P59282 170 aa15.94■□□□□ 0.14
SMPDL3A-203ENST00000539041 DEFB113Q30KQ7 82 aa15.94■□□□□ 0.14
SMPDL3A-203ENST00000539041 HIGD1CA8MV81 97 aa15.93■□□□□ 0.14
SMPDL3A-203ENST00000539041 RNF223E7ERA6 249 aa15.93■□□□□ 0.14
SMPDL3A-203ENST00000539041 NPIPB6E9PJ23 425 aa15.93■□□□□ 0.14
SMPDL3A-203ENST00000539041 CRISP2P16562 243 aa15.93■□□□□ 0.14
SMPDL3A-203ENST00000539041 BLCAPP62952 87 aa15.93■□□□□ 0.14
SMPDL3A-203ENST00000539041 MAPK1IP1LQ8NDC0 245 aa15.93■□□□□ 0.14
SMPDL3A-203ENST00000539041 NOL4LQ96MY1 436 aaPredicted RBP15.93■□□□□ 0.14
SMPDL3A-203ENST00000539041 GRIFINA4D1Z8 144 aa15.92■□□□□ 0.14
SMPDL3A-203ENST00000539041 DEFB112Q30KQ8 113 aa15.92■□□□□ 0.14
SMPDL3A-203ENST00000539041 Q71RC1 249 aaPredicted RBP15.92■□□□□ 0.14
SMPDL3A-203ENST00000539041 TMEM18Q96B42 140 aa15.92■□□□□ 0.14
SMPDL3A-203ENST00000539041 ZC2HC1AQ96GY0 325 aa15.92■□□□□ 0.14
SMPDL3A-203ENST00000539041 METTL26Q96S19 204 aa15.92■□□□□ 0.14
SMPDL3A-203ENST00000539041 ZNF785A8K8V0 405 aa15.92■□□□□ 0.14
SMPDL3A-203ENST00000539041 ATP5L2Q7Z4Y8 100 aa15.92■□□□□ 0.14
SMPDL3A-203ENST00000539041 GFRA4Q9GZZ7 299 aa15.92■□□□□ 0.14
SMPDL3A-203ENST00000539041 A0A1B0GUS0 222 aa15.91■□□□□ 0.14
SMPDL3A-203ENST00000539041 ARL3P36405 182 aa15.91■□□□□ 0.14
SMPDL3A-203ENST00000539041 C1orf194Q5T5A4 169 aa15.91■□□□□ 0.14
SMPDL3A-203ENST00000539041 C16orf54Q6UWD8 224 aa15.91■□□□□ 0.14
SMPDL3A-203ENST00000539041 TCF24Q7RTU0 167 aa15.91■□□□□ 0.14
SMPDL3A-203ENST00000539041 USMG5Q96IX5 58 aa15.91■□□□□ 0.14
SMPDL3A-203ENST00000539041 CSMD1Q96PZ7 3565 aa15.91■□□□□ 0.14
SMPDL3A-203ENST00000539041 FBLL1A6NHQ2 334 aaKnown RBP15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 CHEK1O14757 476 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 IGHV4-31P0DP07 118 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 PRB4P10163 310 aaPredicted RBP15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 S100A12P80511 92 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 Q6ZS46 218 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 TMEM256Q8N2U0 113 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 U3KQE9 123 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 FAM231BA6NCW3 169 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 Q0VG73 95 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 Q5PR19 223 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 ASCL2Q99929 193 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 TP53TG3Q9ULZ0 132 aa15.9■□□□□ 0.14
SMPDL3A-203ENST00000539041 IGKV2-40A0A087WW87 121 aaPredicted RBP15.89■□□□□ 0.13
SMPDL3A-203ENST00000539041 IGKV2D-40P01614 121 aaPredicted RBP15.89■□□□□ 0.13
SMPDL3A-203ENST00000539041 APCSP02743 223 aa15.89■□□□□ 0.13
SMPDL3A-203ENST00000539041 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.89■□□□□ 0.13
SMPDL3A-203ENST00000539041 OR2D3Q8NGH3 330 aa15.89■□□□□ 0.13
SMPDL3A-203ENST00000539041 GTSF1Q8WW33 167 aa15.89■□□□□ 0.13
SMPDL3A-203ENST00000539041 SLC50A1Q9BRV3 221 aa15.89■□□□□ 0.13
SMPDL3A-203ENST00000539041 ZNF580Q9UK33 172 aa15.89■□□□□ 0.13
SMPDL3A-203ENST00000539041 PRRC2AP48634 2157 aaKnown RBP15.88■□□□□ 0.13
SMPDL3A-203ENST00000539041 A0A1B0GXF2 115 aa15.88■□□□□ 0.13
SMPDL3A-203ENST00000539041 IGHV4-59P01825 116 aa15.88■□□□□ 0.13
SMPDL3A-203ENST00000539041 PF4V1P10720 104 aa15.88■□□□□ 0.13
SMPDL3A-203ENST00000539041 CRYBG3Q68DQ2 2970 aa15.88■□□□□ 0.13
SMPDL3A-203ENST00000539041 C8orf49Q96NF6 230 aa15.88■□□□□ 0.13
SMPDL3A-203ENST00000539041 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 IGHV3-66A0A0C4DH42 116 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 ZNF207O43670 478 aaKnown RBP15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 FSHBP01225 129 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 IGLV1-40P01703 118 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms