RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SPRR2AP35326 72 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 PI4KAP42356 2102 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 KLK9Q2XQG4 91 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 C1orf195Q5TG92 126 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 Q5VSD8 79 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 TMEM14EPQ6UXP3 125 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 GPATCH11Q8N954 259 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 PPTC7Q8NI37 304 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 POP5Q969H6 163 aaKnown RBP-1.08□□□□□ -2.58
COPB1-212ENST00000534771 UPF3BQ9BZI7 483 aaKnown RBP-1.08□□□□□ -2.58
COPB1-212ENST00000534771 CMTM6Q9NX76 183 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 RABL2BQ9UNT1 228 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 ABCA1O95477 2261 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 NUP155O75694 1391 aa-1.08□□□□□ -2.58
COPB1-212ENST00000534771 DNAH9Q9NYC9 4486 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 CDK13Q14004 1512 aaKnown RBP-1.09□□□□□ -2.58
COPB1-212ENST00000534771 PKDREJQ9NTG1 2253 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 TRGV10A0A0A0MS01 117 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 NBDYA0A0U1RRE5 68 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 F2Z2F3 143 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 NDUFB3O43676 98 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 SERPINE1P05121 402 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 PET100P0DJ07 73 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 RD3LP0DJH9 198 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 LCN1P31025 176 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 RAB5BP61020 215 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 NAA20P61599 178 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 SNRPD2P62316 118 aaKnown RBP-1.09□□□□□ -2.58
COPB1-212ENST00000534771 KLKP1Q107X0 134 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 ANGPT1Q15389 498 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 S100A7AQ86SG5 101 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 PDZD9Q8IXQ8 264 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 BOD1L2Q8IYS8 172 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 C5orf56Q8N8D9 126 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 KCTD7Q96MP8 289 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 DSCR8Q96T75 97 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 BCL7BQ9BQE9 202 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 CYP4F30PQ9H0H9 118 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 RNF122Q9H9V4 155 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 TMEM14BQ9NUH8 114 aa-1.09□□□□□ -2.58
COPB1-212ENST00000534771 CSMD1Q96PZ7 3565 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 F8VZ95 297 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 IGLV1-51P01701 117 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 OR10J4P0C629 311 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 CCDC172P0C7W6 258 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 SMIM10L2AP0DMW4 78 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 SMIM10L2BP0DMW5 78 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 RPL12P30050 165 aaKnown RBP-1.1□□□□□ -2.59
COPB1-212ENST00000534771 RAB5CP51148 216 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 PMAIP1Q13794 54 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 SNCBQ16143 134 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 SDHAF4Q5VUM1 108 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 Q5XG85 94 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 KRT222Q8N1A0 295 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 FAM172AQ8WUF8 416 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 MSANTD3Q96H12 275 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 C20orf27Q9GZN8 174 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 MAP1LC3AQ9H492 121 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 FBXO5Q9UKT4 447 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 ARL5AQ9Y689 179 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 SMG1Q96Q15 3661 aaKnown RBP-1.1□□□□□ -2.59
COPB1-212ENST00000534771 DMXL1Q9Y485 3027 aa-1.1□□□□□ -2.59
COPB1-212ENST00000534771 MYO7AQ13402 2215 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 ATG2AQ2TAZ0 1938 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 PLXND1Q9Y4D7 1925 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 LAMC1P11047 1609 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 DOCK5Q9H7D0 1870 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 NCOA1Q15788 1441 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 EEF1E1-BLOC1S5C9J1V9 151 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 SMLR1H3BR10 107 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 J3QRK9 145 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 CXCR6O00574 342 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 SLC16A4O15374 487 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 CRYZL1O95825 349 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 RBP1P09455 135 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 SRP14P37108 136 aaKnown RBP-1.11□□□□□ -2.59
COPB1-212ENST00000534771 EIF5AP63241 154 aaKnown RBP-1.11□□□□□ -2.59
COPB1-212ENST00000534771 MYL5Q02045 173 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 CLVS2Q5SYC1 327 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 SPOPLQ6IQ16 392 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 C22orf39Q6P5X5 142 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 FOXI2Q6ZQN5 318 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 DEFB132Q7Z7B7 95 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 Q8IZM0 81 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 LRRC18Q8N456 261 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 ANKRD29Q8N6D5 301 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 OR51D1Q8NGF3 324 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 OR5D16Q8NGK9 328 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 CCL4L1Q8NHW4 92 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 ISOC1Q96CN7 298 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 C19orf60Q96EN9 201 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 HYLS1Q96M11 299 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 BPESC1Q9GZL8 116 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 TMEM126AQ9H061 195 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 TMEM133Q9H2Q1 129 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 POPDC3Q9HBV1 291 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 NAT8BQ9UHF3 227 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 AFDNP55196 1824 aaKnown RBP-1.11□□□□□ -2.59
COPB1-212ENST00000534771 DNAH17Q9UFH2 4485 aa-1.11□□□□□ -2.59
COPB1-212ENST00000534771 BOD1L1Q8NFC6 3051 aa-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms