RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PUSL1Q8N0Z8 303 aaKnown RBP2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 KCNRGQ8N5I3 272 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 NEXN-AS1Q8NBZ9 246 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 OR10R2Q8NGX6 335 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 FAM213BQ8TBF2 198 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 ZNF502Q8TBZ5 544 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 PPP1R1CQ8WVI7 109 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 SECTM1Q8WVN6 248 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 TMEM190Q8WZ59 177 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 PHYHIPQ92561 330 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 EEF1AKMT3Q96AZ1 226 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 UQCC2Q9BRT2 126 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 ATG101Q9BSB4 218 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 NICN1Q9BSH3 213 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 EIF5A2Q9GZV4 153 aaKnown RBP2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 Q9H8V8 135 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 SMPXQ9UHP9 88 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 RAB22AQ9UL26 194 aa2.04□□□□□ -2.08
CHMP4A-208ENST00000534106 IGHV3OR16-12A0A075B7B8 117 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 BORCS7-ASMTA0A0B4J1R7 106 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 TRAV3A0A0B4J244 114 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 IGHV7-4-1A0A0J9YVY3 117 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 A0A1W2PS18 150 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 TMEM218A2RU14 115 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 C9orf170A2RU37 121 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 RAB19A4D1S5 217 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 PRAC2D3DTV9 90 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 K7EPK0 472 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 WRBO00258 174 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SULT1C2O00338 296 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 TGOLN2O43493 480 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SSSCA1O60232 199 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SNAPC5O75971 98 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 DFFBO76075 338 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 IGHV3-48P01763 117 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 APOA2P02652 100 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 FABP1P07148 127 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 CRYGCP07315 174 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SPART-AS1P0CW21 52 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SAA1P0DJI8 122 aaPredicted RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 OR13C7P0DN81 318 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SPP1P10451 314 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 NQO2P16083 231 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 PSMB6P28072 239 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 S100A2P29034 98 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 FCGR2CP31995 323 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 MEOX2P50222 304 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 NDUFA6P56556 154 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 UBE2KP61086 200 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 EIF5AP63241 154 aaKnown RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SSBP1Q04837 148 aaKnown RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 MPV17LQ2QL34 196 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 IAH1Q2TAA2 248 aaPredicted RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 PHLDA2Q53GA4 152 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 PDZD11Q5EBL8 140 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 OR2B11Q5JQS5 317 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 RPL7L1Q6DKI1 246 aaKnown RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 EIF5AL1Q6IS14 154 aaKnown RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 PRR27Q6MZM9 219 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 FAM71F2Q6NXP2 309 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 UQCC3Q6UW78 93 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 Q6ZRN7 208 aaPredicted RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 TCF24Q7RTU0 167 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 C6orf201Q7Z4U5 140 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 STX12Q86Y82 276 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 STHQ8IWL8 128 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 C15orf53Q8NAA6 179 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 OR13C8Q8NGS7 320 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 RXFP4Q8TDU9 374 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 GPX8Q8TED1 209 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 MOB3AQ96BX8 217 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 RAB3CQ96E17 227 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SGK494Q96LW2 274 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SCGB3A2Q96PL1 93 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SPIN2AQ99865 258 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SPIN2BQ9BPZ2 258 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 CMSS1Q9BQ75 279 aaKnown RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SLC25A21Q9BQT8 299 aaPredicted RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 URM1Q9BTM9 101 aaKnown RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 TMEM59Q9BXS4 323 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SLC5A7Q9GZV3 580 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 MS4A6AQ9H2W1 248 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SPACA1Q9HBV2 294 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 Q9N2K0 584 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 RAB9BQ9NP90 201 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 DAZ1Q9NQZ3 744 aaKnown RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 SLC2A9Q9NRM0 540 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 TMEM14BQ9NUH8 114 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 ZNF586Q9NXT0 402 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 IL36GQ9NZH8 169 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 OR5AC2Q9NZP5 309 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 XCL2Q9UBD3 114 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 TNFSF18Q9UNG2 199 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 RCL1Q9Y2P8 373 aaKnown RBP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 ZNF257Q9Y2Q1 563 aa2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 PUS1Q9Y606 427 aaKnown RBP eCLIP2.03□□□□□ -2.08
CHMP4A-208ENST00000534106 NACAE9PAV3 2078 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 IGLV11-55A0A075B6I3 123 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 A0A0A6YYD4 124 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 TRBV7-1A0A0A6YYK4 115 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms