RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 ZNF785A8K8V0 405 aa10.3□□□□□ -0.76
CDC27-210ENST00000533415 ZNF705DP0CH99 300 aaPredicted RBP10.3□□□□□ -0.76
CDC27-210ENST00000533415 ZNF705BP0CI00 300 aaPredicted RBP10.3□□□□□ -0.76
CDC27-210ENST00000533415 SIGLEC15Q6ZMC9 328 aa10.3□□□□□ -0.76
CDC27-210ENST00000533415 IGKV2-40A0A087WW87 121 aaPredicted RBP10.29□□□□□ -0.76
CDC27-210ENST00000533415 PRAC2D3DTV9 90 aa10.29□□□□□ -0.76
CDC27-210ENST00000533415 GGCTO75223 188 aaKnown RBP10.29□□□□□ -0.76
CDC27-210ENST00000533415 CA1P00915 261 aaPredicted RBP10.29□□□□□ -0.76
CDC27-210ENST00000533415 IGKV2D-40P01614 121 aaPredicted RBP10.29□□□□□ -0.76
CDC27-210ENST00000533415 CD28P10747 220 aa10.29□□□□□ -0.76
CDC27-210ENST00000533415 RELQ04864 619 aaPredicted RBP10.29□□□□□ -0.76
CDC27-210ENST00000533415 METTL26Q96S19 204 aa10.29□□□□□ -0.76
CDC27-210ENST00000533415 EPDR1Q9UM22 224 aa10.29□□□□□ -0.76
CDC27-210ENST00000533415 MAST4O15021 2626 aa10.29□□□□□ -0.76
CDC27-210ENST00000533415 TGIF2-C20orf24A0A0A6YYL0 155 aa10.29□□□□□ -0.76
CDC27-210ENST00000533415 A0A0G2JLM5 398 aa10.29□□□□□ -0.76
CDC27-210ENST00000533415 SLC35B1P78383 322 aa10.29□□□□□ -0.76
CDC27-210ENST00000533415 CXCL1P09341 107 aa10.28□□□□□ -0.76
CDC27-210ENST00000533415 TFPI2P48307 235 aa10.28□□□□□ -0.76
CDC27-210ENST00000533415 C8orf86Q6ZUL3 223 aa10.28□□□□□ -0.76
CDC27-210ENST00000533415 WFDC3Q8IUB2 231 aa10.28□□□□□ -0.76
CDC27-210ENST00000533415 TMEM14CQ9P0S9 112 aa10.28□□□□□ -0.76
CDC27-210ENST00000533415 GNG4P50150 75 aa10.28□□□□□ -0.76
CDC27-210ENST00000533415 C1QL4Q86Z23 238 aa10.28□□□□□ -0.76
CDC27-210ENST00000533415 STXBP6Q8NFX7 210 aa10.28□□□□□ -0.76
CDC27-210ENST00000533415 Q8TAT8 98 aa10.28□□□□□ -0.76
CDC27-210ENST00000533415 C11orf52Q96A22 123 aa10.28□□□□□ -0.76
CDC27-210ENST00000533415 H3BUA1 57 aa10.27□□□□□ -0.76
CDC27-210ENST00000533415 SCGB2A1O75556 95 aa10.27□□□□□ -0.76
CDC27-210ENST00000533415 IGLV2-8P01709 118 aa10.27□□□□□ -0.76
CDC27-210ENST00000533415 CRYBA1P05813 215 aa10.27□□□□□ -0.76
CDC27-210ENST00000533415 ATF4P18848 351 aaPredicted RBP10.27□□□□□ -0.76
CDC27-210ENST00000533415 RPEL1Q2QD12 228 aa10.27□□□□□ -0.76
CDC27-210ENST00000533415 PRNTQ86SH4 94 aa10.27□□□□□ -0.76
CDC27-210ENST00000533415 ZFP82Q8N141 532 aa10.27□□□□□ -0.76
CDC27-210ENST00000533415 LINC01006Q8NI28 216 aa10.27□□□□□ -0.76
CDC27-210ENST00000533415 COLCA2A8K830 154 aa10.27□□□□□ -0.77
CDC27-210ENST00000533415 CLDN34H7C241 214 aa10.27□□□□□ -0.77
CDC27-210ENST00000533415 TCRAP04437 139 aa10.27□□□□□ -0.77
CDC27-210ENST00000533415 FAM3BP58499 235 aaPredicted RBP10.27□□□□□ -0.77
CDC27-210ENST00000533415 ERCC8Q13216 396 aa10.27□□□□□ -0.77
CDC27-210ENST00000533415 RHEBQ15382 184 aa10.27□□□□□ -0.77
CDC27-210ENST00000533415 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.27□□□□□ -0.77
CDC27-210ENST00000533415 LINC00322Q6ZN03 302 aaPredicted RBP10.27□□□□□ -0.77
CDC27-210ENST00000533415 Q8N2B8 174 aa10.27□□□□□ -0.77
CDC27-210ENST00000533415 KLHL30-AS1Q8NEE0 82 aa10.27□□□□□ -0.77
CDC27-210ENST00000533415 IGF2BP2-AS1Q96M15 143 aa10.27□□□□□ -0.77
CDC27-210ENST00000533415 NOTCH3Q9UM47 2321 aa10.27□□□□□ -0.77
CDC27-210ENST00000533415 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
CDC27-210ENST00000533415 FOXE3Q13461 319 aa10.26□□□□□ -0.77
CDC27-210ENST00000533415 CMTM2Q8TAZ6 248 aa10.26□□□□□ -0.77
CDC27-210ENST00000533415 SMCO4Q9NRQ5 59 aa10.26□□□□□ -0.77
CDC27-210ENST00000533415 SPINK4O60575 86 aa10.26□□□□□ -0.77
CDC27-210ENST00000533415 TSPAN9O75954 239 aa10.26□□□□□ -0.77
CDC27-210ENST00000533415 TMEM190Q8WZ59 177 aa10.26□□□□□ -0.77
CDC27-210ENST00000533415 RHPN1-AS1Q9BWJ2 59 aa10.26□□□□□ -0.77
CDC27-210ENST00000533415 GAR1Q9NY12 217 aaKnown RBP10.26□□□□□ -0.77
CDC27-210ENST00000533415 NDUFA4O00483 81 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 RPL7P18124 248 aaKnown RBP10.25□□□□□ -0.77
CDC27-210ENST00000533415 TCL1AP56279 114 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 BAGE2Q86Y30 109 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 OR11H1Q8NG94 326 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 ZNF418Q8TF45 676 aaPredicted RBP10.25□□□□□ -0.77
CDC27-210ENST00000533415 C20orf173Q96LM9 149 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 CITED2Q99967 270 aaPredicted RBP10.25□□□□□ -0.77
CDC27-210ENST00000533415 VGLL1Q99990 258 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 OTORQ9NRC9 128 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 CDC42EP3Q9UKI2 254 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 LGALS1P09382 135 aaKnown RBP10.25□□□□□ -0.77
CDC27-210ENST00000533415 FRMD6-AS1P0C7T7 363 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 CNN1P51911 297 aaKnown RBP10.25□□□□□ -0.77
CDC27-210ENST00000533415 HILS1P60008 231 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 GPHB5Q86YW7 130 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 HIST1H2BAQ96A08 127 aa10.25□□□□□ -0.77
CDC27-210ENST00000533415 TRAV8-2A0A0B4J237 113 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 RNASE1P07998 156 aaKnown RBP10.24□□□□□ -0.77
CDC27-210ENST00000533415 ELANEP08246 267 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 UBE2G1P62253 170 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 C5orf17Q8NAS9 161 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 WFDC12Q8WWY7 111 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 C8orf49Q96NF6 230 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 TMEM213A2RRL7 107 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 F6UB75 175 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 IGLV2-11P01706 119 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 ERVFC1-1P60608 527 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 TMEM86BQ8N661 226 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 SFRP2Q96HF1 295 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 ATG101Q9BSB4 218 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 U3KQE9 123 aa10.24□□□□□ -0.77
CDC27-210ENST00000533415 FBN1P35555 2871 aaKnown RBP10.23□□□□□ -0.77
CDC27-210ENST00000533415 H7BYZ3 331 aa10.23□□□□□ -0.77
CDC27-210ENST00000533415 ELOBQ15370 118 aa10.23□□□□□ -0.77
CDC27-210ENST00000533415 Q6ZQT7 251 aa10.23□□□□□ -0.77
CDC27-210ENST00000533415 MYOZ3Q8TDC0 251 aa10.23□□□□□ -0.77
CDC27-210ENST00000533415 GLMPQ8WWB7 406 aa10.23□□□□□ -0.77
CDC27-210ENST00000533415 J3KRW8 73 aa10.23□□□□□ -0.77
CDC27-210ENST00000533415 CHEK1O14757 476 aa10.23□□□□□ -0.77
CDC27-210ENST00000533415 C16orf54Q6UWD8 224 aa10.23□□□□□ -0.77
CDC27-210ENST00000533415 TXNDC17Q9BRA2 123 aa10.23□□□□□ -0.77
CDC27-210ENST00000533415 GPR61Q9BZJ8 451 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms