RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 LINC01356Q8N9X3 169 aa11.79□□□□□ -0.52
SRPRA-206ENST00000532259 VN1R17PQ8TDU5 208 aa11.79□□□□□ -0.52
SRPRA-206ENST00000532259 MRPL18Q9H0U6 180 aaKnown RBP11.79□□□□□ -0.52
SRPRA-206ENST00000532259 PITPNC1Q9UKF7 332 aa11.79□□□□□ -0.52
SRPRA-206ENST00000532259 KLF12Q9Y4X4 402 aa11.79□□□□□ -0.52
SRPRA-206ENST00000532259 S100A8P05109 93 aa11.78□□□□□ -0.52
SRPRA-206ENST00000532259 FMC1Q96HJ9 113 aa11.78□□□□□ -0.52
SRPRA-206ENST00000532259 A6NDX4 124 aa11.78□□□□□ -0.52
SRPRA-206ENST00000532259 IGHV4-59P01825 116 aa11.78□□□□□ -0.52
SRPRA-206ENST00000532259 APOHP02749 345 aaPredicted RBP11.78□□□□□ -0.52
SRPRA-206ENST00000532259 TPPP2P59282 170 aa11.78□□□□□ -0.52
SRPRA-206ENST00000532259 CDPF1Q6NVV7 123 aa11.78□□□□□ -0.52
SRPRA-206ENST00000532259 NIT2Q9NQR4 276 aa11.78□□□□□ -0.52
SRPRA-206ENST00000532259 SELENOKQ9Y6D0 94 aa11.78□□□□□ -0.52
SRPRA-206ENST00000532259 MYO9AB2RTY4 2548 aa11.77□□□□□ -0.52
SRPRA-206ENST00000532259 J3QKU1 62 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 BMPR1BO00238 502 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 LTAP01374 205 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 IGLV2-11P01706 119 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 TRBV12-3P01733 135 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 ATP5G2Q06055 141 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 DEFB112Q30KQ8 113 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 TCF24Q7RTU0 167 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 Q86TA4 180 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 EEF1AKMT3Q96AZ1 226 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 TRAV20A0A0B4J274 112 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 SCGB2A1O75556 95 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 GZMBP10144 247 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 C19orf54Q5BKX5 351 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 MLST8Q9BVC4 326 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 KLK15Q9H2R5 256 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 NAT8BQ9UHF3 227 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 SMAD5-AS1Q9Y6J3 95 aa11.77□□□□□ -0.53
SRPRA-206ENST00000532259 SMIM27A0A1W2PRY6 76 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 ZNF705FA8MVS1 300 aaPredicted RBP11.76□□□□□ -0.53
SRPRA-206ENST00000532259 Q5PR19 223 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 TMEM183AQ8IXX5 376 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 TMEM256Q8N2U0 113 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 TXN2Q99757 166 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 HIST1H2BLQ99880 126 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 TCEAL7Q9BRU2 100 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 ZFAND3Q9H8U3 227 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 IGKV2-40A0A087WW87 121 aaPredicted RBP11.76□□□□□ -0.53
SRPRA-206ENST00000532259 IGKV2D-40P01614 121 aaPredicted RBP11.76□□□□□ -0.53
SRPRA-206ENST00000532259 DEFB113Q30KQ7 82 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 PYY3Q5JQD4 70 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 NEU1Q99519 415 aa11.76□□□□□ -0.53
SRPRA-206ENST00000532259 FLNAP21333 2647 aaKnown RBP11.76□□□□□ -0.53
SRPRA-206ENST00000532259 CUBNO60494 3623 aa11.75□□□□□ -0.53
SRPRA-206ENST00000532259 HIGD1CA8MV81 97 aa11.75□□□□□ -0.53
SRPRA-206ENST00000532259 NUPR1O60356 82 aa11.75□□□□□ -0.53
SRPRA-206ENST00000532259 PF4V1P10720 104 aa11.75□□□□□ -0.53
SRPRA-206ENST00000532259 NUP35Q8NFH5 326 aa11.75□□□□□ -0.53
SRPRA-206ENST00000532259 AAMDCQ9H7C9 122 aa11.75□□□□□ -0.53
SRPRA-206ENST00000532259 RPL7P18124 248 aaKnown RBP11.75□□□□□ -0.53
SRPRA-206ENST00000532259 CAMPP49913 170 aa11.75□□□□□ -0.53
SRPRA-206ENST00000532259 DAZAP1Q96EP5 407 aaKnown RBP11.75□□□□□ -0.53
SRPRA-206ENST00000532259 PACRGQ96M98 296 aaPredicted RBP11.75□□□□□ -0.53
SRPRA-206ENST00000532259 CLPSL1A2RUU4 121 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 DIRC3C9JPN6 131 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 F2Z2F3 143 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 P01737 135 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 SMIM6P0DI80 62 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 RPL19P84098 196 aaKnown RBP11.74□□□□□ -0.53
SRPRA-206ENST00000532259 RNF182Q8N6D2 247 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 MBD6Q96DN6 1003 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 ZC2HC1AQ96GY0 325 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 C8orf49Q96NF6 230 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 ACANP16112 2415 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 ZNF785A8K8V0 405 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 IGHV4-31P0DP07 118 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 FAM231DQ6ZW35 169 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 S100A7AQ86SG5 101 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 GRAMD2BQ96HH9 432 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 Q96MF0 132 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 SSBP4Q9BWG4 385 aaPredicted RBP11.74□□□□□ -0.53
SRPRA-206ENST00000532259 PSG8Q9UQ74 426 aa11.74□□□□□ -0.53
SRPRA-206ENST00000532259 TRBV7-1A0A0A6YYK4 115 aa11.73□□□□□ -0.53
SRPRA-206ENST00000532259 IGHG2P01859 326 aa11.73□□□□□ -0.53
SRPRA-206ENST00000532259 AMBPP02760 352 aa11.73□□□□□ -0.53
SRPRA-206ENST00000532259 SSTP61278 116 aa11.73□□□□□ -0.53
SRPRA-206ENST00000532259 KLK9Q2XQG4 91 aa11.73□□□□□ -0.53
SRPRA-206ENST00000532259 Q8TAT8 98 aa11.73□□□□□ -0.53
SRPRA-206ENST00000532259 KLK9Q9UKQ9 250 aa11.73□□□□□ -0.53
SRPRA-206ENST00000532259 RNF24Q9Y225 148 aa11.73□□□□□ -0.53
SRPRA-206ENST00000532259 IZUMO1RA6ND01 250 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 PGLYRP4Q96LB8 373 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 DUX5Q96PT3 197 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 RPP21Q9H633 154 aaKnown RBP11.72□□□□□ -0.53
SRPRA-206ENST00000532259 NF1P21359 2839 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 TRAV9-1A0A075B6T8 112 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 BUB3O43684 328 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 GATA3P23771 443 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 PPIFP30405 207 aaKnown RBP11.72□□□□□ -0.53
SRPRA-206ENST00000532259 ARL3P36405 182 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 PSG3Q16557 428 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 C10orf99Q6UWK7 81 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 KRTAP1-3Q8IUG1 177 aa11.72□□□□□ -0.53
SRPRA-206ENST00000532259 PDZD2O15018 2839 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms