RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 RNASE10Q5GAN6 216 aaKnown RBP1.92□□□□□ -2.1
USP47-211ENST00000531513 LRRC18Q8N456 261 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 MMGT1Q8N4V1 131 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 LINC00301Q8NCQ3 95 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 OR4B1Q8NGF8 309 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 OR5A2Q8NGI9 324 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 CBLN4Q9NTU7 201 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 CALML5Q9NZT1 146 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 VWDEQ8N2E2 1590 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 PIK3C2AO00443 1686 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 MPDZO75970 2070 aa1.92□□□□□ -2.1
USP47-211ENST00000531513 CCDC171Q6TFL3 1326 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 OVOS2A0A0J9YW53 1432 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 OVOS2Q6IE36 1432 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 ARHGEF11O15085 1522 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 TRPM1Q7Z4N2 1603 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 RTL9Q8NET4 1388 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 F8W036 122 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 PROSCO94903 275 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 UBL3O95164 117 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 CRPP02741 224 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 S100A1P23297 94 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 SELENOWP63302 87 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 MRPS36P82909 103 aaKnown RBP1.91□□□□□ -2.1
USP47-211ENST00000531513 HIST1H1AQ02539 215 aaPredicted RBP1.91□□□□□ -2.1
USP47-211ENST00000531513 PATE2Q6UY27 113 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 Q6ZRN7 208 aaPredicted RBP1.91□□□□□ -2.1
USP47-211ENST00000531513 COA5Q86WW8 74 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 Q8IYB0 196 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 OR4K15Q8NH41 348 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 ZNF418Q8TF45 676 aaPredicted RBP1.91□□□□□ -2.1
USP47-211ENST00000531513 NAT14Q8WUY8 206 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 C14orf132Q9NPU4 83 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 OR5AC2Q9NZP5 309 aa1.91□□□□□ -2.1
USP47-211ENST00000531513 COL5A1P20908 1838 aaPredicted RBP1.91□□□□□ -2.1
USP47-211ENST00000531513 DOCK4Q8N1I0 1966 aa1.9□□□□□ -2.1
USP47-211ENST00000531513 CACNA1GO43497 2377 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 A0A1B0GW64 132 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 K7ERJ3 54 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 LYRM1O43325 122 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 APOC1P02654 83 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 NCS1P62166 190 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 KLRD1Q13241 179 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 WHAMMP3Q1A5X7 153 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 Q5XG85 94 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 FP248Q71RG6 208 aaPredicted RBP1.9□□□□□ -2.11
USP47-211ENST00000531513 TSTD1Q8NFU3 115 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 OR5H6Q8NGV6 325 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 PRELID3AQ96N28 172 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 SMIM3Q9BZL3 60 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 LY96Q9Y6Y9 160 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 DISP2A7MBM2 1401 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 NUMA1Q14980 2115 aa1.9□□□□□ -2.11
USP47-211ENST00000531513 C17orf112F2Z3M2 114 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 UQCRQO14949 82 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 SMIM24O75264 130 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 NCR2O95944 276 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 MT-ND6P03923 174 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 GPX1P07203 203 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 TSPAN19P0C672 248 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 RAB5CP51148 216 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 DNAJB13P59910 316 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 KRTAP13-4Q3LI77 160 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 TMEM244Q5VVB8 128 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 TMEM14EPQ6UXP3 125 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 LINC00311Q8N616 119 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 FAM216BQ8N7L0 139 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 MORN4Q8NDC4 146 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 BRK1Q8WUW1 75 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 DIRC1Q969H9 104 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 NUP98P52948 1817 aa1.89□□□□□ -2.11
USP47-211ENST00000531513 NISCHQ9Y2I1 1504 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 TRAV12-1A0A0B4J245 112 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 FAM92AA1XBS5 289 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 OR2T8A6NH00 312 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 C2orf70A6NJV1 201 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 TPT1P13693 172 aaKnown RBP1.88□□□□□ -2.11
USP47-211ENST00000531513 CRYGSP22914 178 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 QRFPP83859 136 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 HSD17B12Q53GQ0 312 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 RPS19BP1Q86WX3 136 aaKnown RBP1.88□□□□□ -2.11
USP47-211ENST00000531513 TEX29Q8N6K0 151 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 CHCHD1Q96BP2 118 aaKnown RBP1.88□□□□□ -2.11
USP47-211ENST00000531513 RETNLBQ9BQ08 111 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 C2orf88Q9BSF0 95 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 ERG28Q9UKR5 140 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 TAF1LQ8IZX4 1826 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 ICE1Q9Y2F5 2266 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 DSPPQ9NZW4 1301 aa1.88□□□□□ -2.11
USP47-211ENST00000531513 RFX7Q2KHR2 1363 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 COL4A5P29400 1685 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.87□□□□□ -2.11
USP47-211ENST00000531513 CCDC160A6NGH7 325 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 MIF4GDA9UHW6 222 aaKnown RBP1.87□□□□□ -2.11
USP47-211ENST00000531513 OR1I1O60431 355 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 MT-ND4LP03901 98 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 MAXP61244 160 aa1.87□□□□□ -2.11
USP47-211ENST00000531513 RPS25P62851 125 aaKnown RBP1.87□□□□□ -2.11
USP47-211ENST00000531513 PDE6HQ13956 83 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms