RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 IL22RA2Q969J5 263 aa6.36□□□□□ -1.39
NEDD8-206ENST00000531430 RPUSD4Q96CM3 377 aaKnown RBP6.36□□□□□ -1.39
NEDD8-206ENST00000531430 C18orf15Q96N68 181 aa6.36□□□□□ -1.39
NEDD8-206ENST00000531430 SCGB3A2Q96PL1 93 aa6.36□□□□□ -1.39
NEDD8-206ENST00000531430 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
NEDD8-206ENST00000531430 MCUBQ9NWR8 336 aa6.36□□□□□ -1.39
NEDD8-206ENST00000531430 SHPKQ9UHJ6 478 aa6.36□□□□□ -1.39
NEDD8-206ENST00000531430 TRGV2A0A075B6R0 118 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 A0A096LPF7 62 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 HYPMO75409 117 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 RPL7P18124 248 aaKnown RBP6.35□□□□□ -1.39
NEDD8-206ENST00000531430 CXCL3P19876 107 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 ICAM4Q14773 271 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 TMED4Q7Z7H5 227 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 RNASE8Q8TDE3 154 aaKnown RBP6.35□□□□□ -1.39
NEDD8-206ENST00000531430 ZNF503Q96F45 646 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 PRRT1Q99946 306 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 TMPRSS5Q9H3S3 457 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 SCP2D1Q9UJQ7 156 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 SLC45A2Q9UMX9 530 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 HIGD1AQ9Y241 93 aa6.35□□□□□ -1.39
NEDD8-206ENST00000531430 TRAV12-3A0A0B4J271 114 aa6.34□□□□□ -1.39
NEDD8-206ENST00000531430 H3BP45 60 aa6.34□□□□□ -1.39
NEDD8-206ENST00000531430 MED6O75586 246 aa6.34□□□□□ -1.39
NEDD8-206ENST00000531430 NXPH4O95158 308 aa6.34□□□□□ -1.39
NEDD8-206ENST00000531430 DNAH10OSP0CZ25 163 aa6.34□□□□□ -1.39
NEDD8-206ENST00000531430 IL18Q14116 193 aa6.34□□□□□ -1.39
NEDD8-206ENST00000531430 CYP2G1PQ6ZSU1 146 aa6.34□□□□□ -1.39
NEDD8-206ENST00000531430 TRAV9-2A0A087WT02 112 aa6.33□□□□□ -1.4
NEDD8-206ENST00000531430 H3BRN7 92 aa6.33□□□□□ -1.4
NEDD8-206ENST00000531430 H3BTX0 84 aa6.33□□□□□ -1.4
NEDD8-206ENST00000531430 CTDSP2O14595 271 aa6.33□□□□□ -1.4
NEDD8-206ENST00000531430 IGHV3-53P01767 116 aa6.33□□□□□ -1.4
NEDD8-206ENST00000531430 GCSHP23434 173 aa6.33□□□□□ -1.4
NEDD8-206ENST00000531430 SRPXP78539 464 aa6.33□□□□□ -1.4
NEDD8-206ENST00000531430 SSBP1Q04837 148 aaKnown RBP6.33□□□□□ -1.4
NEDD8-206ENST00000531430 Q6ZTI0 123 aa6.33□□□□□ -1.4
NEDD8-206ENST00000531430 CIB3Q96Q77 187 aaPredicted RBP6.33□□□□□ -1.4
NEDD8-206ENST00000531430 SHANK2-AS3Q9BTD1 123 aa6.33□□□□□ -1.4
NEDD8-206ENST00000531430 NAA50Q9GZZ1 169 aaKnown RBP6.33□□□□□ -1.4
NEDD8-206ENST00000531430 ARL6Q9H0F7 186 aa6.33□□□□□ -1.4
NEDD8-206ENST00000531430 STRAPQ9Y3F4 350 aaKnown RBP6.33□□□□□ -1.4
NEDD8-206ENST00000531430 A0A087WTM6 91 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 TRGV1A0A0A0MS02 117 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 PMS2P5A8MQ11 134 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 H3BNG1 76 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 PAX4O43316 350 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 SYNGR2O43760 224 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 HOXB5P09067 269 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 LINC00869P0C866 280 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 VAMP1P23763 118 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 RRAS2P62070 204 aaPredicted RBP6.32□□□□□ -1.4
NEDD8-206ENST00000531430 MRPS10P82664 201 aaKnown RBP6.32□□□□□ -1.4
NEDD8-206ENST00000531430 GFI1BQ5VTD9 330 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 CDPF1Q6NVV7 123 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 Q6ZRN7 208 aaPredicted RBP6.32□□□□□ -1.4
NEDD8-206ENST00000531430 ACOT7LQ6ZUV0 252 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 S100A7AQ86SG5 101 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 NFE4Q86UQ8 179 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 DIRAS2Q96HU8 199 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 VSIG2Q96IQ7 327 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 MIXL1Q9H2W2 232 aa6.32□□□□□ -1.4
NEDD8-206ENST00000531430 PRAC2D3DTV9 90 aa6.31□□□□□ -1.4
NEDD8-206ENST00000531430 PITX3O75364 302 aa6.31□□□□□ -1.4
NEDD8-206ENST00000531430 Q6ZSN1 163 aa6.31□□□□□ -1.4
NEDD8-206ENST00000531430 LINC00612Q8N6U2 182 aa6.31□□□□□ -1.4
NEDD8-206ENST00000531430 GSN-AS1Q9NRJ2 163 aa6.31□□□□□ -1.4
NEDD8-206ENST00000531430 FUT9Q9Y231 359 aa6.31□□□□□ -1.4
NEDD8-206ENST00000531430 ICOSQ9Y6W8 199 aa6.31□□□□□ -1.4
NEDD8-206ENST00000531430 PIGBOS1A0A0B4J2F0 54 aa6.3□□□□□ -1.4
NEDD8-206ENST00000531430 PRAF2O60831 178 aa6.3□□□□□ -1.4
NEDD8-206ENST00000531430 LEPP41159 167 aa6.3□□□□□ -1.4
NEDD8-206ENST00000531430 LYPD5Q6UWN5 251 aa6.3□□□□□ -1.4
NEDD8-206ENST00000531430 PATE2Q6UY27 113 aa6.3□□□□□ -1.4
NEDD8-206ENST00000531430 ZBTB8BQ8NAP8 495 aaPredicted RBP6.3□□□□□ -1.4
NEDD8-206ENST00000531430 SMIM4Q8WVI0 70 aa6.3□□□□□ -1.4
NEDD8-206ENST00000531430 C20orf144Q9BQM9 153 aa6.3□□□□□ -1.4
NEDD8-206ENST00000531430 ARV1Q9H2C2 271 aa6.3□□□□□ -1.4
NEDD8-206ENST00000531430 PSENENQ9NZ42 101 aa6.3□□□□□ -1.4
NEDD8-206ENST00000531430 MYCBP2O75592 4640 aa6.3□□□□□ -1.4
NEDD8-206ENST00000531430 A0A087X0K7 114 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 IGLV5-52A0A0A0MRZ9 124 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 ANKRD20A5PA0PJZ0 165 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 E5RGE8 158 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 NPIPB6E9PJ23 425 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 GOSR2O14653 212 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 PSCAO43653 123 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 CT45A10P0DMU9 189 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 SELENOTP62341 195 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 POLR2GP62487 172 aaKnown RBP eCLIP6.29□□□□□ -1.4
NEDD8-206ENST00000531430 DAZ2Q13117 558 aaKnown RBP6.29□□□□□ -1.4
NEDD8-206ENST00000531430 LCN15Q6UWW0 184 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 LINC00305Q7Z4B0 112 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 ZNF431Q8TF32 576 aaPredicted RBP6.29□□□□□ -1.4
NEDD8-206ENST00000531430 C8orf49Q96NF6 230 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 PYGO2Q9BRQ0 406 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 SLC50A1Q9BRV3 221 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 ZNF331Q9NQX6 463 aaPredicted RBP6.29□□□□□ -1.4
NEDD8-206ENST00000531430 CCDC59Q9P031 241 aaKnown RBP6.29□□□□□ -1.4
NEDD8-206ENST00000531430 RABL2BQ9UNT1 228 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms