RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 BATF3Q9NR55 127 aa9.34□□□□□ -0.91
HIF3A-212ENST00000529205 PRR13Q9NZ81 148 aa9.34□□□□□ -0.91
HIF3A-212ENST00000529205 SCP2D1Q9UJQ7 156 aa9.34□□□□□ -0.91
HIF3A-212ENST00000529205 RNF24Q9Y225 148 aa9.34□□□□□ -0.91
HIF3A-212ENST00000529205 IGKV1OR2-108A0A075B7D4 117 aa9.33□□□□□ -0.92
HIF3A-212ENST00000529205 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
HIF3A-212ENST00000529205 RGS5O15539 181 aa9.33□□□□□ -0.92
HIF3A-212ENST00000529205 IAPPP10997 89 aa9.33□□□□□ -0.92
HIF3A-212ENST00000529205 LINC00315P59091 139 aa9.33□□□□□ -0.92
HIF3A-212ENST00000529205 AKR1C1Q04828 323 aa9.33□□□□□ -0.92
HIF3A-212ENST00000529205 Q5VSD8 79 aa9.33□□□□□ -0.92
HIF3A-212ENST00000529205 OR51S1Q8NGJ8 323 aa9.33□□□□□ -0.92
HIF3A-212ENST00000529205 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
HIF3A-212ENST00000529205 GAGE12BA1L429 117 aa9.32□□□□□ -0.92
HIF3A-212ENST00000529205 GAGE7O76087 117 aa9.32□□□□□ -0.92
HIF3A-212ENST00000529205 GAGE12FP0CL80 117 aa9.32□□□□□ -0.92
HIF3A-212ENST00000529205 GAGE12GP0CL81 117 aa9.32□□□□□ -0.92
HIF3A-212ENST00000529205 GAGE12IP0CL82 117 aa9.32□□□□□ -0.92
HIF3A-212ENST00000529205 GATA2P23769 480 aaPredicted RBP9.32□□□□□ -0.92
HIF3A-212ENST00000529205 PSG3Q16557 428 aa9.32□□□□□ -0.92
HIF3A-212ENST00000529205 DIRAS2Q96HU8 199 aa9.32□□□□□ -0.92
HIF3A-212ENST00000529205 HIGD1AQ9Y241 93 aa9.32□□□□□ -0.92
HIF3A-212ENST00000529205 HERC1Q15751 4861 aa9.32□□□□□ -0.92
HIF3A-212ENST00000529205 DUXBA0A1W2PPF3 345 aa9.31□□□□□ -0.92
HIF3A-212ENST00000529205 SIVA1O15304 175 aa9.31□□□□□ -0.92
HIF3A-212ENST00000529205 IL5P05113 134 aa9.31□□□□□ -0.92
HIF3A-212ENST00000529205 CXCL3P19876 107 aa9.31□□□□□ -0.92
HIF3A-212ENST00000529205 NFE4Q86UQ8 179 aa9.31□□□□□ -0.92
HIF3A-212ENST00000529205 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 H3BRN7 92 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 HYPMO75409 117 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 OR5G3P0C626 314 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 ANXA7P20073 488 aaKnown RBP9.3□□□□□ -0.92
HIF3A-212ENST00000529205 HOXA5P20719 270 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 XGP55808 180 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 LINC00612Q8N6U2 182 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 SMIM4Q8WVI0 70 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 RPUSD4Q96CM3 377 aaKnown RBP9.3□□□□□ -0.92
HIF3A-212ENST00000529205 SHANK2-AS3Q9BTD1 123 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 SRRQ9GZT4 340 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 RABL2AQ9UBK7 228 aaPredicted RBP9.3□□□□□ -0.92
HIF3A-212ENST00000529205 RABL2BQ9UNT1 228 aa9.3□□□□□ -0.92
HIF3A-212ENST00000529205 SMCO3A2RU48 225 aa9.29□□□□□ -0.92
HIF3A-212ENST00000529205 WRBO00258 174 aa9.29□□□□□ -0.92
HIF3A-212ENST00000529205 PITX3O75364 302 aa9.29□□□□□ -0.92
HIF3A-212ENST00000529205 SLC25A6P12236 298 aa9.29□□□□□ -0.92
HIF3A-212ENST00000529205 IL18Q14116 193 aa9.29□□□□□ -0.92
HIF3A-212ENST00000529205 TMEM182Q6ZP80 229 aaPredicted RBP9.29□□□□□ -0.92
HIF3A-212ENST00000529205 TRIM63Q969Q1 353 aa9.29□□□□□ -0.92
HIF3A-212ENST00000529205 MCUBQ9NWR8 336 aa9.29□□□□□ -0.92
HIF3A-212ENST00000529205 TRAV9-2A0A087WT02 112 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 A0A087X0K7 114 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 FABP12A6NFH5 140 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 CTDSPLO15194 276 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 SYNGR2O43760 224 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 SELENOTP62341 195 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 ICAM4Q14773 271 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 BAK1Q16611 211 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 SPANXN5Q5MJ07 72 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 CYP2G1PQ6ZSU1 146 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 C18orf15Q96N68 181 aa9.28□□□□□ -0.92
HIF3A-212ENST00000529205 STRAPQ9Y3F4 350 aaKnown RBP9.28□□□□□ -0.92
HIF3A-212ENST00000529205 TRGV2A0A075B6R0 118 aa9.27□□□□□ -0.93
HIF3A-212ENST00000529205 PRSS46E5RG02 174 aa9.27□□□□□ -0.93
HIF3A-212ENST00000529205 CXCL2P19875 107 aa9.27□□□□□ -0.93
HIF3A-212ENST00000529205 Q6ZRN7 208 aaPredicted RBP9.27□□□□□ -0.93
HIF3A-212ENST00000529205 SLC50A1Q9BRV3 221 aa9.27□□□□□ -0.93
HIF3A-212ENST00000529205 A0A096LPF7 62 aa9.26□□□□□ -0.93
HIF3A-212ENST00000529205 ANKRD20A5PA0PJZ0 165 aa9.26□□□□□ -0.93
HIF3A-212ENST00000529205 J3QL48 77 aa9.26□□□□□ -0.93
HIF3A-212ENST00000529205 LINC00869P0C866 280 aa9.26□□□□□ -0.93
HIF3A-212ENST00000529205 PLP1P60201 277 aa9.26□□□□□ -0.93
HIF3A-212ENST00000529205 DAZ2Q13117 558 aaKnown RBP9.26□□□□□ -0.93
HIF3A-212ENST00000529205 TMEM128Q5BJH2 165 aa9.26□□□□□ -0.93
HIF3A-212ENST00000529205 LCN15Q6UWW0 184 aa9.26□□□□□ -0.93
HIF3A-212ENST00000529205 ACOT7LQ6ZUV0 252 aa9.26□□□□□ -0.93
HIF3A-212ENST00000529205 PYGO2Q9BRQ0 406 aa9.26□□□□□ -0.93
HIF3A-212ENST00000529205 TMPRSS5Q9H3S3 457 aa9.26□□□□□ -0.93
HIF3A-212ENST00000529205 SMR3BP02814 79 aaPredicted RBP9.25□□□□□ -0.93
HIF3A-212ENST00000529205 VAMP1P23763 118 aa9.25□□□□□ -0.93
HIF3A-212ENST00000529205 FAUP35544 74 aaKnown RBP9.25□□□□□ -0.93
HIF3A-212ENST00000529205 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
HIF3A-212ENST00000529205 LEPP41159 167 aa9.25□□□□□ -0.93
HIF3A-212ENST00000529205 IFITM3Q01628 133 aa9.25□□□□□ -0.93
HIF3A-212ENST00000529205 GFI1BQ5VTD9 330 aa9.25□□□□□ -0.93
HIF3A-212ENST00000529205 TMED4Q7Z7H5 227 aa9.25□□□□□ -0.93
HIF3A-212ENST00000529205 ZNF331Q9NQX6 463 aaPredicted RBP9.25□□□□□ -0.93
HIF3A-212ENST00000529205 ICOSQ9Y6W8 199 aa9.25□□□□□ -0.93
HIF3A-212ENST00000529205 PMS2P5A8MQ11 134 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 H3BP45 60 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 J3KRW8 73 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 NXPH4O95158 308 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 GCSHP23434 173 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 S100A5P33763 92 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 PYDC2Q56P42 97 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 PXDC1Q5TGL8 231 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 Q6ZTI0 123 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 LRTM2Q8N967 370 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 VSIG2Q96IQ7 327 aa9.24□□□□□ -0.93
HIF3A-212ENST00000529205 ARL6Q9H0F7 186 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms