RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 FAM103A1Q9BTL3 118 aaKnown RBP9.22□□□□□ -0.93
USF1-208ENST00000528768 ZNF331Q9NQX6 463 aaPredicted RBP9.22□□□□□ -0.93
USF1-208ENST00000528768 NBEAL2Q6ZNJ1 2754 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 TRBV6-1A0A0K0K1D8 114 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 SERTM2A0A1B0GWG4 89 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 SMIM27A0A1W2PRY6 76 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 IGLV2-8P01709 118 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 IL4P05112 153 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 FCGR2BP31994 310 aaPredicted RBP9.21□□□□□ -0.94
USF1-208ENST00000528768 RAB9AP51151 201 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 DYNAPQ8N1N2 210 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 Q8N9W7 124 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 PACRGQ96M98 296 aaPredicted RBP9.21□□□□□ -0.94
USF1-208ENST00000528768 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
USF1-208ENST00000528768 RNASE7Q9H1E1 156 aaKnown RBP9.21□□□□□ -0.94
USF1-208ENST00000528768 AAMDCQ9H7C9 122 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 ZNF492Q9P255 531 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 FBXL7Q9UJT9 491 aa9.21□□□□□ -0.94
USF1-208ENST00000528768 IGHV7-81A0A0B4J1V7 117 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 FBLL1A6NHQ2 334 aaKnown RBP9.2□□□□□ -0.94
USF1-208ENST00000528768 HLA-DQA1P01909 254 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 TCRAP04437 139 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 AMY1AP04745 511 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 RPL7P18124 248 aaKnown RBP9.2□□□□□ -0.94
USF1-208ENST00000528768 CSN1S1P47710 185 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 PSG9Q00887 426 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 PAX8Q06710 450 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 PDE6HQ13956 83 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 PDZD11Q5EBL8 140 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 UNQ5815/PRO19632Q6UWF5 114 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 ARL6IP6Q8N6S5 226 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 ZNF491Q8N8L2 437 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 FANCD2OSQ96PS1 177 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 HIST1H2BLQ99880 126 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 HIF1ANQ9NWT6 349 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 NAT8BQ9UHF3 227 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 RPH3ALQ9UNE2 315 aa9.2□□□□□ -0.94
USF1-208ENST00000528768 TRBV19A0A075B6N1 114 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 IGHV1-69DA0A0B4J2H0 117 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 A8MWL6 223 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 SNURFLB1AK76 121 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 BMPR1BO00238 502 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 OR2J3O76001 311 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 IGHV1-69P01742 117 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 CRISP2P16562 243 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 IER3P46695 156 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 GNG5P63218 68 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 CT83Q5H943 113 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 ASPHD1Q5U4P2 390 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 GFI1BQ5VTD9 330 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 RUSC1-AS1Q66K80 236 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 OR4B1Q8NGF8 309 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 RABAC1Q9UI14 185 aa9.19□□□□□ -0.94
USF1-208ENST00000528768 SOX21Q9Y651 276 aaPredicted RBP9.19□□□□□ -0.94
USF1-208ENST00000528768 PRKDCP78527 4128 aaKnown RBP9.19□□□□□ -0.94
USF1-208ENST00000528768 TRAV34A0A0B4J273 112 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 TRAV20A0A0B4J274 112 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 CENPVL3A0A0U1RRI6 287 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 IFITM10A6NMD0 228 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 NDUFB8O95169 186 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 MSMBP08118 114 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 ADMP35318 185 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 RAB4BP61018 213 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 PAFAH1B2P68402 229 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 KLK9Q2XQG4 91 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 KLF17Q5JT82 389 aaPredicted RBP9.18□□□□□ -0.94
USF1-208ENST00000528768 LEMD1Q68G75 181 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 ATP5L2Q7Z4Y8 100 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 NUDT10Q8NFP7 164 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 TSKUQ8WUA8 353 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 EEF1AKMT3Q96AZ1 226 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 NUDT11Q96G61 164 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 ATP6V0BQ99437 205 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 ZNF586Q9NXT0 402 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 KLK9Q9UKQ9 250 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 ZFP30Q9Y2G7 519 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 MOB4Q9Y3A3 225 aa9.18□□□□□ -0.94
USF1-208ENST00000528768 LTAP01374 205 aa9.17□□□□□ -0.94
USF1-208ENST00000528768 P01737 135 aa9.17□□□□□ -0.94
USF1-208ENST00000528768 CBLN1P23435 193 aa9.17□□□□□ -0.94
USF1-208ENST00000528768 GATA3P23771 443 aa9.17□□□□□ -0.94
USF1-208ENST00000528768 TPPP2P59282 170 aa9.17□□□□□ -0.94
USF1-208ENST00000528768 ECSCRQ19T08 205 aa9.17□□□□□ -0.94
USF1-208ENST00000528768 PRR27Q6MZM9 219 aa9.17□□□□□ -0.94
USF1-208ENST00000528768 TMEM75Q8N9X5 138 aa9.17□□□□□ -0.94
USF1-208ENST00000528768 OR5R1Q8NH85 324 aa9.17□□□□□ -0.94
USF1-208ENST00000528768 WIPF2Q8TF74 440 aaPredicted RBP9.17□□□□□ -0.94
USF1-208ENST00000528768 LINC00479Q96M42 142 aa9.17□□□□□ -0.94
USF1-208ENST00000528768 RPP21Q9H633 154 aaKnown RBP9.17□□□□□ -0.94
USF1-208ENST00000528768 TRBV7-1A0A0A6YYK4 115 aa9.16□□□□□ -0.94
USF1-208ENST00000528768 FAM231BA6NCW3 169 aa9.16□□□□□ -0.94
USF1-208ENST00000528768 M0QZK8 103 aa9.16□□□□□ -0.94
USF1-208ENST00000528768 APCSP02743 223 aa9.16□□□□□ -0.94
USF1-208ENST00000528768 AMBPP02760 352 aa9.16□□□□□ -0.94
USF1-208ENST00000528768 IGLC2P0DOY2 106 aa9.16□□□□□ -0.94
USF1-208ENST00000528768 EGR2P11161 476 aaPredicted RBP9.16□□□□□ -0.94
USF1-208ENST00000528768 TCL1AP56279 114 aa9.16□□□□□ -0.94
USF1-208ENST00000528768 NDPQ00604 133 aa9.16□□□□□ -0.94
USF1-208ENST00000528768 Q0VG73 95 aa9.16□□□□□ -0.94
USF1-208ENST00000528768 JOSD1Q15040 202 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms