RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 LRRC20Q8TCA0 184 aa8.88□□□□□ -0.99
CLNS1A-207ENST00000527133 C15orf40Q8WUR7 153 aa8.88□□□□□ -0.99
CLNS1A-207ENST00000527133 RPUSD4Q96CM3 377 aaKnown RBP8.88□□□□□ -0.99
CLNS1A-207ENST00000527133 SHANK2-AS3Q9BTD1 123 aa8.88□□□□□ -0.99
CLNS1A-207ENST00000527133 PARD6GQ9BYG4 376 aaPredicted RBP8.88□□□□□ -0.99
CLNS1A-207ENST00000527133 VCX3AQ9NNX9 186 aa8.88□□□□□ -0.99
CLNS1A-207ENST00000527133 NXPH4O95158 308 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 ATP6V1G2O95670 118 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 GCSHP23434 173 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 AKR1C1Q04828 323 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 GFI1BQ5VTD9 330 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 Q6ZTI0 123 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 TMED4Q7Z7H5 227 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 OR51S1Q8NGJ8 323 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 AP3S1Q92572 193 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 PRRT1Q99946 306 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 C20orf144Q9BQM9 153 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 FUNDC2Q9BWH2 189 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 HIGD1AQ9Y241 93 aa8.87□□□□□ -0.99
CLNS1A-207ENST00000527133 A0A087X0K7 114 aa8.86□□□□□ -0.99
CLNS1A-207ENST00000527133 PRSS46E5RG02 174 aa8.86□□□□□ -0.99
CLNS1A-207ENST00000527133 AKAIN1P0CW23 69 aa8.86□□□□□ -0.99
CLNS1A-207ENST00000527133 RAP2BP61225 183 aa8.86□□□□□ -0.99
CLNS1A-207ENST00000527133 SSBP1Q04837 148 aaKnown RBP8.86□□□□□ -0.99
CLNS1A-207ENST00000527133 NFE4Q86UQ8 179 aa8.86□□□□□ -0.99
CLNS1A-207ENST00000527133 DNAH8Q96JB1 4490 aa8.86□□□□□ -0.99
CLNS1A-207ENST00000527133 TRGV2A0A075B6R0 118 aa8.85□□□□□ -0.99
CLNS1A-207ENST00000527133 J3KRW8 73 aa8.85□□□□□ -0.99
CLNS1A-207ENST00000527133 PITX3O75364 302 aa8.85□□□□□ -0.99
CLNS1A-207ENST00000527133 HYPMO75409 117 aa8.85□□□□□ -0.99
CLNS1A-207ENST00000527133 OR5G3P0C626 314 aa8.85□□□□□ -0.99
CLNS1A-207ENST00000527133 SRPXP78539 464 aa8.85□□□□□ -0.99
CLNS1A-207ENST00000527133 CCDC190Q86UF4 302 aa8.85□□□□□ -0.99
CLNS1A-207ENST00000527133 CLVS1Q8IUQ0 354 aaPredicted RBP8.85□□□□□ -0.99
CLNS1A-207ENST00000527133 A0A087WXM4 84 aa8.84□□□□□ -0.99
CLNS1A-207ENST00000527133 SMCO3A2RU48 225 aa8.84□□□□□ -0.99
CLNS1A-207ENST00000527133 WRBO00258 174 aa8.84□□□□□ -0.99
CLNS1A-207ENST00000527133 IL5P05113 134 aa8.84□□□□□ -0.99
CLNS1A-207ENST00000527133 ANXA3P12429 323 aa8.84□□□□□ -0.99
CLNS1A-207ENST00000527133 RPP30P78346 268 aaKnown RBP8.84□□□□□ -0.99
CLNS1A-207ENST00000527133 MRPS10P82664 201 aaKnown RBP8.84□□□□□ -0.99
CLNS1A-207ENST00000527133 DAZ2Q13117 558 aaKnown RBP8.84□□□□□ -0.99
CLNS1A-207ENST00000527133 CYP2G1PQ6ZSU1 146 aa8.84□□□□□ -0.99
CLNS1A-207ENST00000527133 ACOT7LQ6ZUV0 252 aa8.84□□□□□ -0.99
CLNS1A-207ENST00000527133 TRAV12-3A0A0B4J271 114 aa8.83□□□□□ -1
CLNS1A-207ENST00000527133 PMS2P5A8MQ11 134 aa8.83□□□□□ -1
CLNS1A-207ENST00000527133 H3BP45 60 aa8.83□□□□□ -1
CLNS1A-207ENST00000527133 MED6O75586 246 aa8.83□□□□□ -1
CLNS1A-207ENST00000527133 SNRPCP09234 159 aaKnown RBP8.83□□□□□ -1
CLNS1A-207ENST00000527133 LINC00869P0C866 280 aa8.83□□□□□ -1
CLNS1A-207ENST00000527133 ANXA7P20073 488 aaKnown RBP8.83□□□□□ -1
CLNS1A-207ENST00000527133 SPANXN5Q5MJ07 72 aa8.83□□□□□ -1
CLNS1A-207ENST00000527133 SMIM4Q8WVI0 70 aa8.83□□□□□ -1
CLNS1A-207ENST00000527133 SCGB3A2Q96PL1 93 aa8.83□□□□□ -1
CLNS1A-207ENST00000527133 CIB3Q96Q77 187 aaPredicted RBP8.83□□□□□ -1
CLNS1A-207ENST00000527133 MIXL1Q9H2W2 232 aa8.83□□□□□ -1
CLNS1A-207ENST00000527133 ICOSQ9Y6W8 199 aa8.83□□□□□ -1
CLNS1A-207ENST00000527133 PRAC2D3DTV9 90 aa8.82□□□□□ -1
CLNS1A-207ENST00000527133 RGS5O15539 181 aa8.82□□□□□ -1
CLNS1A-207ENST00000527133 ZNF331Q9NQX6 463 aaPredicted RBP8.82□□□□□ -1
CLNS1A-207ENST00000527133 GSN-AS1Q9NRJ2 163 aa8.82□□□□□ -1
CLNS1A-207ENST00000527133 SCP2D1Q9UJQ7 156 aa8.82□□□□□ -1
CLNS1A-207ENST00000527133 TRAV9-2A0A087WT02 112 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 TRGV1A0A0A0MS02 117 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 MRPS12O15235 138 aaKnown RBP8.81□□□□□ -1
CLNS1A-207ENST00000527133 PAX4O43316 350 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 SYNGR2O43760 224 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 PLP1P60201 277 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 LCN15Q6UWW0 184 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 PYGO2Q9BRQ0 406 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 TMEM70Q9BUB7 260 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 ARL6Q9H0F7 186 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 MCUBQ9NWR8 336 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 MSRB1Q9NZV6 116 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 FUT9Q9Y231 359 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 LY96Q9Y6Y9 160 aa8.81□□□□□ -1
CLNS1A-207ENST00000527133 IGLV5-52A0A0A0MRZ9 124 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 PIGBOS1A0A0B4J2F0 54 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 LINC00854A0A1B0GVQ3 168 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 DUXBA0A1W2PPF3 345 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 ANKRD20A5PA0PJZ0 165 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 H3BTX0 84 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 ZNF324O75467 553 aaPredicted RBP8.8□□□□□ -1
CLNS1A-207ENST00000527133 CT45A10P0DMU9 189 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 SLC25A6P12236 298 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 CXCL2P19875 107 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 LEPP41159 167 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 LYPD5Q6UWN5 251 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 S100A7AQ86SG5 101 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 LINC00467Q9BRT7 94 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 SLC50A1Q9BRV3 221 aa8.8□□□□□ -1
CLNS1A-207ENST00000527133 NAA50Q9GZZ1 169 aaKnown RBP8.8□□□□□ -1
CLNS1A-207ENST00000527133 STRAPQ9Y3F4 350 aaKnown RBP8.8□□□□□ -1
CLNS1A-207ENST00000527133 LRP1Q07954 4544 aaKnown RBP8.79□□□□□ -1
CLNS1A-207ENST00000527133 NPIPB6E9PJ23 425 aa8.79□□□□□ -1
CLNS1A-207ENST00000527133 SLC17A3O00476 420 aa8.79□□□□□ -1
CLNS1A-207ENST00000527133 IGHV3-53P01767 116 aa8.79□□□□□ -1
CLNS1A-207ENST00000527133 SELENOTP62341 195 aa8.79□□□□□ -1
CLNS1A-207ENST00000527133 IL18Q14116 193 aa8.79□□□□□ -1
CLNS1A-207ENST00000527133 PATE2Q6UY27 113 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms