RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 COL1A2P08123 1366 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 MTCL1Q9Y4B5 1905 aaKnown RBP2.36□□□□□ -2.03
COPB1-205ENST00000526527 IGHV3OR16-13A0A075B7E8 117 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 IGHV1-69DA0A0B4J2H0 117 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 H3BT86 120 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 M0R2P5 195 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 GNGT2O14610 69 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 COX7A2P2O60397 106 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 HYPMO75409 117 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 LINC00869P0C866 280 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 IGLC2P0DOY2 106 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 IGLC3P0DOY3 106 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 ELK1P19419 428 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 VDAC1P21796 283 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 CXCL6P80162 114 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 DEFB103AP81534 67 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 IL17AQ16552 155 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 PSMG4Q5JS54 123 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 C9orf66Q5T8R8 295 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 Q5XG85 94 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 ZNF57Q68EA5 555 aaPredicted RBP2.36□□□□□ -2.03
COPB1-205ENST00000526527 ZNF660Q6AZW8 331 aaPredicted RBP2.36□□□□□ -2.03
COPB1-205ENST00000526527 DPPA3Q6W0C5 159 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 H2AFVQ71UI9 128 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 COMMD6Q7Z4G1 85 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 MDP1Q86V88 176 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 NPWQ8N729 165 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 SIGLECL1Q8N7X8 197 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.36□□□□□ -2.03
COPB1-205ENST00000526527 CSNK1G2-AS1Q8NCQ2 148 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 NABP1Q96AH0 204 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 NEURL3Q96EH8 262 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 ZNF414Q96IQ9 312 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 CARD19Q96LW7 228 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 ZNF714Q96N38 554 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 C18orf15Q96N68 181 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 CCL13Q99616 98 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 PLEKHF2Q9H8W4 249 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 C21orf62Q9NYP8 219 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 SLC25A15Q9Y619 301 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 MYH7BA7E2Y1 1941 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 DSPPQ9NZW4 1301 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 BRCA2P51587 3418 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 SCN10AQ9Y5Y9 1956 aa2.36□□□□□ -2.03
COPB1-205ENST00000526527 TANC1Q9C0D5 1861 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 CENPFP49454 3210 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 A0A1W2PP18 115 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 C9JQL5 133 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 C17orf112F2Z3M2 114 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 SYNGR2O43760 224 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 SCRG1O75711 98 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 HLA-DQA1P01909 254 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 MT-ATP8P03928 68 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 CD3DP04234 171 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 TCRAP04437 139 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 SLC25A5P05141 298 aaKnown RBP2.35□□□□□ -2.03
COPB1-205ENST00000526527 ZNF688P0C7X2 276 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 SLC25A6P12236 298 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 CD52P31358 61 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 FAUP35544 74 aaKnown RBP2.35□□□□□ -2.03
COPB1-205ENST00000526527 CSN1S1P47710 185 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 KLK7P49862 253 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 ATP5EP56381 51 aaPredicted RBP2.35□□□□□ -2.03
COPB1-205ENST00000526527 SMIM11AP58511 58 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 KRTDAPP60985 99 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 YPEL3P61236 119 aaPredicted RBP2.35□□□□□ -2.03
COPB1-205ENST00000526527 HBBP68871 147 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 ZNF345Q14585 488 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 ELOCQ15369 112 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 C15orf32Q32M92 178 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 LGALS9BQ3B8N2 356 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 TDRG1Q3Y452 100 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 C6orf99Q4VX62 202 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 LCA10Q71F78 164 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 LINC00596Q86U02 117 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 SAXO1Q8IYX7 474 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 ZNF101Q8IZC7 436 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 TMEM75Q8N9X5 138 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 C15orf53Q8NAA6 179 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 OR10G2Q8NGC3 310 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 LMX1AQ8TE12 382 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 PPDPFLQ8WWR9 84 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 FXYD5Q96DB9 178 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 GABARAPL3Q9BY60 117 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 SLC35B3Q9H1N7 401 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 NDUFB11Q9NX14 153 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 SPRR3Q9UBC9 169 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 Q9Y3F1 56 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 LINC00312Q9Y6C7 94 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 HCFC1P51610 2035 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 SIP14410 1827 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 DENND4AQ7Z401 1863 aa2.35□□□□□ -2.03
COPB1-205ENST00000526527 GON4LQ3T8J9 2241 aa2.34□□□□□ -2.03
COPB1-205ENST00000526527 MYH9P35579 1960 aaKnown RBP2.34□□□□□ -2.03
COPB1-205ENST00000526527 TRBV24-1A0A075B6N3 115 aa2.34□□□□□ -2.03
COPB1-205ENST00000526527 IGKV6D-21A0A0A0MT36 114 aa2.34□□□□□ -2.03
COPB1-205ENST00000526527 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.34□□□□□ -2.03
COPB1-205ENST00000526527 TRAV19A0A0A6YYK7 116 aa2.34□□□□□ -2.03
COPB1-205ENST00000526527 IGHV3-16A0A0C4DH30 117 aa2.34□□□□□ -2.03
COPB1-205ENST00000526527 TRBV5-4A0A0C4DH59 114 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms