RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 OR8D4Q8NGM9 314 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 ITLN2Q8WWU7 325 aaPredicted RBP3.11□□□□□ -1.91
CD44-213ENST00000525209 ELSPBP1Q96BH3 223 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 MRPL32Q9BYC8 188 aaKnown RBP3.11□□□□□ -1.91
CD44-213ENST00000525209 SLC39A9Q9NUM3 307 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 MDFICQ9P1T7 246 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 PHLDA3Q9Y5J5 127 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 IER3IP1Q9Y5U9 82 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 V9GYS6 101 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 BRWD1Q9NSI6 2320 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 ZDBF2Q9HCK1 2354 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 CDH23Q9H251 3354 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 MICAL3Q7RTP6 2002 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 SIPA1L1O43166 1804 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 ZNF236Q9UL36 1845 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 IGHV3-21A0A0B4J1V1 117 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 A0A0G2JMM0 328 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 A0A1W2PPB8 328 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 KIR3DP1A8MWS1 328 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 FNDC10F2Z333 226 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 NDUFB3O43676 98 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 MPC2O95563 127 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 SOD1P00441 154 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 INSP01308 110 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 IGLV2-11P01706 119 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 C1QAP02745 245 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 TLX1NBP0CAT3 122 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 NPPCP23582 126 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 ZNF93P35789 620 aaPredicted RBP3.1□□□□□ -1.91
CD44-213ENST00000525209 AKR1C2P52895 323 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 ARPP19P56211 112 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 TPPP2P59282 170 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 MYL5Q02045 173 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 Q1RN00 199 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
CD44-213ENST00000525209 SPANXN3Q5MJ09 141 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 SPATA12Q7Z6I5 190 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 AMN1Q8IY45 258 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 SAXO1Q8IYX7 474 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 CD177Q8N6Q3 437 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 C14orf178Q8N769 122 aaPredicted RBP3.1□□□□□ -1.91
CD44-213ENST00000525209 APCDD1LQ8NCL9 501 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 WFDC5Q8TCV5 224 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 YPEL2Q96QA6 119 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 MIEN1Q9BRT3 115 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 DEFB126Q9BYW3 111 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 PLA2G2FQ9BZM2 168 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 FAM60AQ9NP50 221 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 RPRMQ9NS64 109 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 ZNF586Q9NXT0 402 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 SNX12Q9UMY4 172 aa3.1□□□□□ -1.91
CD44-213ENST00000525209 PTPRSQ13332 1948 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 PCNX3Q9H6A9 2034 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 COL4A6Q14031 1691 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 A0A087X0T9 212 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 K7ERS5 55 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 LINC01565O15544 149 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 NDUFB2O95178 105 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 TNFP01375 233 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 HLA-DQA1P01909 254 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 TCRAP04437 139 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 OR5AC1P0C628 307 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 ZNF286BP0CG31 522 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 PTHLHP12272 177 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 RNASE4P34096 147 aaKnown RBP3.09□□□□□ -1.91
CD44-213ENST00000525209 TGFBR1P36897 503 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 AQP4P55087 323 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 TSPEAR-AS2P59090 65 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 S100A10P60903 97 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 TMEM258P61165 79 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 RPL18Q07020 188 aaKnown RBP3.09□□□□□ -1.91
CD44-213ENST00000525209 NTM-AS1Q6ZSK4 140 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 C18orf65Q6ZTR6 163 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 LINC00311Q8N616 119 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 ZFAND2AQ8N6M9 145 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 Q8N976 141 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 PLPP5Q8NEB5 264 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 DPH3Q96FX2 82 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 CIB3Q96Q77 187 aaPredicted RBP3.09□□□□□ -1.91
CD44-213ENST00000525209 SPANXDQ9BXN6 97 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 DUSP21Q9H596 190 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 XAGE1AQ9HD64 81 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 TAS2R8Q9NYW2 309 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 BDP1A6H8Y1 2624 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 CACNA1IQ9P0X4 2223 aa3.09□□□□□ -1.91
CD44-213ENST00000525209 PARP14Q460N5 1801 aa3.09□□□□□ -1.92
CD44-213ENST00000525209 REV3LO60673 3130 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 TANC1Q9C0D5 1861 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 WDFY4Q6ZS81 3184 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 IGLV3-10A0A075B6K4 115 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 LEPROTO15243 131 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 HIST1H2BKO60814 126 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 HIST1H2BJP06899 126 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 IGHV3-30-3P0DP02 117 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 HLA-DRB4P13762 266 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 RPL27AP46776 148 aaKnown RBP3.08□□□□□ -1.92
CD44-213ENST00000525209 HIST1H4AP62805 103 aaKnown RBP3.08□□□□□ -1.92
CD44-213ENST00000525209 LPAL2Q16609 132 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 IZUMO2Q6UXV1 221 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 ZNF767PQ75MW2 155 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms