RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	MRPL30	Q8TCC3	161 aa	Known RBP	2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DCANP1	Q8TF63	244 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	GEMIN6	Q8WXD5	167 aa	Known RBP	2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	CIB3	Q96Q77	187 aa	Predicted RBP	2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	CCL13	Q99616	98 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SPANXD	Q9BXN6	97 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DUSP21	Q9H596	190 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	C16orf95	Q9H693	158 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SMCO4	Q9NRQ5	59 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	FKBP11	Q9NYL4	201 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	BET1L	Q9NYM9	111 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	RNF11	Q9Y3C5	154 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	AP4S1	Q9Y587	144 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	LINC00312	Q9Y6C7	94 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	MICAL3	Q7RTP6	2002 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TANC1	Q9C0D5	1861 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	LTBP2	Q14767	1821 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	KIAA1671	Q9BY89	1806 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TRGV10	A0A0A0MS01	117 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DPRX	A6NFQ7	191 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	OR51F1	A6NGY5	319 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ZNF727	A8MUV8	499 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298		H3BQ15	152 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	LGALS9	O00182	355 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SOCS1	O15524	211 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ZNF73	O43830	326 aa	Predicted RBP	2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TLX1NB	P0CAT3	122 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	IFITM1	P13164	125 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	CCL5	P13501	91 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SDC2	P34741	201 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	RPL22	P35268	128 aa	Known RBP	2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	QRFP	P83859	136 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	RRN3P1	Q2M238	152 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	LINC00303	Q3SY05	128 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	KRTAP5-4	Q6L8H1	288 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DNAJC24	Q6P3W2	148 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	C22orf39	Q6P5X5	142 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ZFP2	Q6ZN57	461 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TIFAB	Q6ZNK6	161 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298		Q6ZUT4	128 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	AAED1	Q7RTV5	226 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	KCNRG	Q8N5I3	272 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DRAM1	Q8N682	238 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ZFP62	Q8NB50	900 aa	Predicted RBP	2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	OR5AK2	Q8NH90	309 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	C15orf40	Q8WUR7	153 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	BRK1	Q8WUW1	75 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	KCNS1	Q96KK3	526 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	C18orf15	Q96N68	181 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TMEM243	Q9BU79	118 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ATG5	Q9H1Y0	275 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TP73-AS1	Q9UF72	201 aa		2.78	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DENND4C	Q5VZ89	1909 aa		2.78	□□□□□ -1.97
CTNNA1-238	ENST00000523298	PDCD11	Q14690	1871 aa	Known RBP	2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	MYO7A	Q13402	2215 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	CENPF	P49454	3210 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	DYSF	O75923	2080 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	IGKV1D-43	A0A0B4J1Z2	117 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	IGHV1-58	A0A0C4DH39	117 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TCRBV3S1	A0A5B6	114 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	IRGM	A1A4Y4	181 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	OR2T8	A6NH00	312 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	IGLL5	B9A064	214 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298		M0R129	80 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298		M0R378	163 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	COX7A2L	O14548	114 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	GEMIN2	O14893	280 aa	Known RBP	2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	INAFM2	P0DMQ5	153 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	NFYB	P25208	207 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	INPP1	P49441	399 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	DAP	P51397	102 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	RBMY1F	Q15415	496 aa	Known RBP	2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TDRG1	Q3Y452	100 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	UBE2NL	Q5JXB2	153 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	HES3	Q5TGS1	186 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	MRPL54	Q6P161	138 aa	Known RBP	2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	IZUMO2	Q6UXV1	221 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298		Q6ZR03	302 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	LCA10	Q71F78	164 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	LINC00305	Q7Z4B0	112 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	LINC00596	Q86U02	117 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	MARCH3	Q86UD3	253 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	LINC00311	Q8N616	119 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	ZNF709	Q8N972	641 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	LINC00301	Q8NCQ3	95 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	RAB2B	Q8WUD1	216 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	C10orf82	Q8WW14	230 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	PSMF1	Q92530	271 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TOMM6	Q96B49	74 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	C2orf50	Q96LR7	162 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	NPVF	Q9HCQ7	196 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	ASF1B	Q9NVP2	202 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	KLK12	Q9UKR0	248 aa		2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	NOP16	Q9Y3C1	178 aa	Known RBP	2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	ZNF706	Q9Y5V0	76 aa	Predicted RBP	2.77	□□□□□ -1.97
CTNNA1-238	ENST00000523298	ZNF638	Q14966	1978 aa	Known RBP	2.76	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TRAV9-1	A0A075B6T8	112 aa		2.76	□□□□□ -1.97
CTNNA1-238	ENST00000523298	ODAM	A1E959	279 aa		2.76	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TMEM262	E9PQX1	116 aa		2.76	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms