RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 TCRBV4S1A1TA0A5B7 111 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 MRPS14O60783 128 aaKnown RBP2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 MT-ND6P03923 174 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 SCGB1A1P11684 91 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 RNASE3P12724 160 aaKnown RBP2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 RPS3P23396 243 aaKnown RBP eCLIP2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 CDK6Q00534 326 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 C1orf137Q5JT78 98 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 C4orf22Q6V702 233 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 OR4C6Q8NH72 309 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 C4orf3Q8WVX3 66 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 LXNQ9BS40 222 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 TANC2Q9HCD6 1990 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 MED9Q9NWA0 146 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 RASL12Q9NYN1 266 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 RTL9Q8NET4 1388 aa2.03□□□□□ -2.08
CALCOCO2-222ENST00000514006 IGKV2D-26A0A0A0MRZ7 120 aa2.03□□□□□ -2.08
CALCOCO2-222ENST00000514006 OR2T8A6NH00 312 aa2.03□□□□□ -2.08
CALCOCO2-222ENST00000514006 B4DSR2 109 aa2.03□□□□□ -2.08
CALCOCO2-222ENST00000514006 HYPMO75409 117 aa2.03□□□□□ -2.08
CALCOCO2-222ENST00000514006 DSCR4P56555 118 aaPredicted RBP2.03□□□□□ -2.08
CALCOCO2-222ENST00000514006 C1orf134Q5TEV5 83 aa2.03□□□□□ -2.08
CALCOCO2-222ENST00000514006 FAM216BQ8N7L0 139 aa2.03□□□□□ -2.08
CALCOCO2-222ENST00000514006 C15orf53Q8NAA6 179 aa2.03□□□□□ -2.08
CALCOCO2-222ENST00000514006 KIAA1549Q9HCM3 1950 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 TRBV6-8A0A0A6YYG3 113 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 E7EUB6 86 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 J3KT08 172 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 LYRM1O43325 122 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 IGLV1-51P01701 117 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 RPS28P62857 69 aaKnown RBP2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 C2orf82Q6UX34 121 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 LINC00305Q7Z4B0 112 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 Q8N814 137 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 RAB37Q96AX2 223 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 HYLS1Q96M11 299 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 MCEEQ96PE7 176 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 TP53RKQ96S44 253 aa2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 VIRMAQ69YN4 1812 aaKnown RBP2.02□□□□□ -2.09
CALCOCO2-222ENST00000514006 NISCHQ9Y2I1 1504 aa2.01□□□□□ -2.09
CALCOCO2-222ENST00000514006 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.01□□□□□ -2.09
CALCOCO2-222ENST00000514006 TMEM229BQ8NBD8 167 aa2.01□□□□□ -2.09
CALCOCO2-222ENST00000514006 MUCL1Q96DR8 90 aa2.01□□□□□ -2.09
CALCOCO2-222ENST00000514006 SPANXCQ9NY87 97 aa2.01□□□□□ -2.09
CALCOCO2-222ENST00000514006 KLK9Q9UKQ9 250 aa2.01□□□□□ -2.09
CALCOCO2-222ENST00000514006 CHCHD2Q9Y6H1 151 aaPredicted RBP2.01□□□□□ -2.09
CALCOCO2-222ENST00000514006 COL4A1P02462 1669 aa2.01□□□□□ -2.09
CALCOCO2-222ENST00000514006 SORL1Q92673 2214 aa2.01□□□□□ -2.09
CALCOCO2-222ENST00000514006 FBN1P35555 2871 aaKnown RBP2□□□□□ -2.09
CALCOCO2-222ENST00000514006 TRAV10A0A0B4J240 114 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 hDV103S1A0JD37 113 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 CCDC160A6NGH7 325 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 DEGS1O15121 323 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 TEX261Q6UWH6 196 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 TEX29Q8N6K0 151 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 OR4B1Q8NGF8 309 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 OR5H6Q8NGV6 325 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 U3KQ87 197 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 FHAD1B1AJZ9 1412 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 TNS3Q68CZ2 1445 aa2□□□□□ -2.09
CALCOCO2-222ENST00000514006 TNRC6AQ8NDV7 1962 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 PTPRFP10586 1907 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 MGAMO43451 1857 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 FRMPD1Q5SYB0 1578 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 A0A087WX48 190 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 TRAV13-1A0A0B4J241 112 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 TRBV7-6A0A0J9YX20 115 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 ERC2-IT1O76042 136 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 CD2P06729 351 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 MRPS36P82909 103 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 OR8B8Q15620 311 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 VMA21Q3ZAQ7 101 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 LRRC18Q8N456 261 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 PRELID3AQ96N28 172 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 CYSTM1Q9H1C7 97 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 TAF9BQ9HBM6 251 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 SNURFQ9Y675 71 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 LAMB2P55268 1798 aa1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 CHD3Q12873 2000 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 KDM6AO15550 1401 aaPredicted RBP1.99□□□□□ -2.09
CALCOCO2-222ENST00000514006 TNRC6BQ9UPQ9 1833 aaKnown RBP1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 TRAV36DV7A0A075B6V5 113 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 A0A087WSZ3 146 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 TRAV27A0A087WT01 109 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 LOC107984640A0A0U1RRK4 108 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 A0A1B0GX51 115 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 ZNF736B4DX44 427 aaPredicted RBP1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 H3BMG7 143 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 ZNF93P35789 620 aaPredicted RBP1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 CNBPP62633 177 aaKnown RBP1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 PSG9Q00887 426 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 UNQ6190/PRO20217Q6UXQ8 127 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 DIRC1Q969H9 104 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 GGACTQ9BVM4 153 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 JPT1Q9UK76 154 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 A2MP01023 1474 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 ARAP1Q96P48 1450 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 POLEQ07864 2286 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 LAMB4A4D0S4 1761 aa1.98□□□□□ -2.09
CALCOCO2-222ENST00000514006 IGKV3D-7A0A0C4DH55 119 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms