RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 LINC00311Q8N616 119 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 C3orf56Q8N813 242 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 OR10AC1Q8NH08 325 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 CLDND2Q8NHS1 167 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 MYOZ3Q8TDC0 251 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 LMX1AQ8TE12 382 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 KLK6Q92876 244 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 FAM19A4Q96LR4 140 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 AGPAT4-IT1Q9H0P7 198 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 ZNF331Q9NQX6 463 aaPredicted RBP2.99□□□□□ -1.93
NIPBL-207ENST00000513819 CMC2Q9NRP2 79 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 LAMTOR3Q9UHA4 124 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 MON2Q7Z3U7 1717 aa2.99□□□□□ -1.93
NIPBL-207ENST00000513819 CHD3Q12873 2000 aaKnown RBP2.98□□□□□ -1.93
NIPBL-207ENST00000513819 LAMB2P55268 1798 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 hCG_1818297A0A087WSY0 165 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 TRAV1-2A0A0B4J238 106 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 TRAV13-1A0A0B4J241 112 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 A6NIN4 97 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 A8MU10 97 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 A8MWL6 223 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 ZNF736B4DX44 427 aaPredicted RBP2.98□□□□□ -1.93
NIPBL-207ENST00000513819 C12orf77C9JDV5 145 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 MRPS12O15235 138 aaKnown RBP2.98□□□□□ -1.93
NIPBL-207ENST00000513819 DEDDO75618 318 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 IGKV1D-16P01601 117 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 TRACP01848 142 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 CHTF8P0CG12 524 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 DNAH10OSP0CZ25 163 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 SMIM13P0DJ93 91 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 COX7CP15954 63 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 MPV17P39210 176 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 FBXW4P57775 412 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 DAZ2Q13117 558 aaKnown RBP2.98□□□□□ -1.93
NIPBL-207ENST00000513819 CASC10Q5T4H9 136 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 CFAP126Q5VTH2 177 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 NCBP2-AS2Q69YL0 99 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 C12orf73Q69YU5 71 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 C22orf39Q6P5X5 142 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 TMEM136Q6ZRR5 245 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 DAZ4Q86SG3 579 aaKnown RBP2.98□□□□□ -1.93
NIPBL-207ENST00000513819 TRAPPC6BQ86SZ2 158 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 TEN1Q86WV5 123 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 BAGE3Q86Y29 109 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 BAGE2Q86Y30 109 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 PRR15Q8IV56 129 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 SBSPONQ8IVN8 264 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 TMEM61Q8N0U2 210 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 OR10G2Q8NGC3 310 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 IGF2BP2-AS1Q96M15 143 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 OR2A5Q96R48 311 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 SHANK2-AS3Q9BTD1 123 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 IMUPQ9GZP8 106 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 DAZ1Q9NQZ3 744 aaKnown RBP2.98□□□□□ -1.93
NIPBL-207ENST00000513819 DAZ3Q9NR90 486 aaKnown RBP2.98□□□□□ -1.93
NIPBL-207ENST00000513819 OTORQ9NRC9 128 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 RPUSD1Q9UJJ7 312 aaKnown RBP2.98□□□□□ -1.93
NIPBL-207ENST00000513819 CELA1Q9UNI1 258 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 KLK5Q9Y337 293 aaPredicted RBP2.98□□□□□ -1.93
NIPBL-207ENST00000513819 KCNE3Q9Y6H6 103 aa2.98□□□□□ -1.93
NIPBL-207ENST00000513819 FAM208AQ9UK61 1670 aaKnown RBP2.98□□□□□ -1.93
NIPBL-207ENST00000513819 RGPD2P0DJD1 1756 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 NHSL1Q5SYE7 1610 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 DSPPQ9NZW4 1301 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 QSER1Q2KHR3 1735 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 NWD2Q9ULI1 1742 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 TRAV12-2A0A075B6T6 113 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 A8MT66 165 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 KRTAP4-16G5E9R7 235 aaPredicted RBP2.97□□□□□ -1.93
NIPBL-207ENST00000513819 M0R129 80 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 ZNF861PO60384 105 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 OR1I1O60431 355 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 APOC2P02655 101 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 FGF1P05230 155 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 PYYP10082 97 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 NOVP48745 357 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 UBE2G1P62253 170 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 SNRPFP62306 86 aaKnown RBP2.97□□□□□ -1.93
NIPBL-207ENST00000513819 Q6ZQT7 251 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 Q6ZS49 121 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 FAM213BQ8TBF2 198 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 BORCS8Q96FH0 119 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 C18orf15Q96N68 181 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 RTL8AQ9BWD3 113 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 AMMECR1Q9Y4X0 333 aaPredicted RBP2.97□□□□□ -1.93
NIPBL-207ENST00000513819 DOCK2Q92608 1830 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 TDRD6O60522 2096 aaKnown RBP2.97□□□□□ -1.93
NIPBL-207ENST00000513819 LOXHD1Q8IVV2 1947 aa2.97□□□□□ -1.93
NIPBL-207ENST00000513819 SBF2Q86WG5 1849 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 MYO10Q9HD67 2058 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 TRBV19A0A075B6N1 114 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 SMIM26A0A096LP01 95 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 C2orf70A6NJV1 201 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 IGLL5B9A064 214 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 SMKR1H3BMG3 65 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 LYZL6O75951 148 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 PRH1P02810 166 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 CCL1P22362 96 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 COL8A2P25067 703 aa2.96□□□□□ -1.94
NIPBL-207ENST00000513819 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms