RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 SYNE1Q8NF91 8797 aaKnown RBP0.07□□□□□ -2.4
NPHP3-210ENST00000512094 STRCQ7RTU9 1775 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 CACNA1HO95180 2353 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 FAM208BQ5VWN6 2430 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 ASXL3Q9C0F0 2248 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 FANCMQ8IYD8 2048 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 RIMBP3CA6NJZ7 1639 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 RIMBP3BA6NNM3 1639 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 RIMBP3Q9UFD9 1639 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 ZFYVE9O95405 1425 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 FMN1Q68DA7 1419 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 JMJD1CQ15652 2540 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 SNAPC4Q5SXM2 1469 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 CECR2Q9BXF3 1484 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 TRAV27A0A087WT01 109 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 LOC107984156A0A0G2JMH3 177 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 DUXBA0A1W2PPF3 345 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 hDV103S1A0JD37 113 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 C9orf170A2RU37 121 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 TMEM114B3SHH9 223 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 B4DSR2 109 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 G3V2T6 193 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 TMEM256-PLSCR3K7ERE1 68 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 FXYD1O00168 92 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 AIPO00170 330 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 TAX1BP3O14907 124 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 RER1O15258 196 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 KRTAP2-3P0C7H8 128 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 CCL4P13236 92 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 HLA-EP13747 358 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 RPS3P23396 243 aaKnown RBP eCLIP0.06□□□□□ -2.4
NPHP3-210ENST00000512094 DYNLT3P51808 116 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 CAV3P56539 151 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 RPL37AP61513 92 aaKnown RBP0.06□□□□□ -2.4
NPHP3-210ENST00000512094 SNRPD3P62318 126 aaKnown RBP0.06□□□□□ -2.4
NPHP3-210ENST00000512094 MRPS25P82663 173 aaKnown RBP0.06□□□□□ -2.4
NPHP3-210ENST00000512094 EIF3IQ13347 325 aaKnown RBP0.06□□□□□ -2.4
NPHP3-210ENST00000512094 DIAPH2-AS1Q14236 149 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 NEDD8Q15843 81 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 SNCBQ16143 134 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 SPINK13Q1W4C9 94 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 RGS21Q2M5E4 152 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 SCGB2B2Q4G0G5 96 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 C1orf134Q5TEV5 83 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 LINC00299Q6ZSB3 139 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 ZNF833PQ6ZTB9 187 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 C3orf62Q6ZUJ4 267 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 ARPINQ7Z6K5 226 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 ARL17AQ8IVW1 177 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 ATOH7Q8N100 152 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 OR5AK2Q8NH90 309 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 Q8TAT8 98 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 POP5Q969H6 163 aaKnown RBP0.06□□□□□ -2.4
NPHP3-210ENST00000512094 TEX37Q96LM6 180 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 HYLS1Q96M11 299 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 OR4C12Q96R67 309 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 CCL19Q99731 98 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 C9orf16Q9BUW7 83 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 CCDC94Q9BW85 323 aaPredicted RBP0.06□□□□□ -2.4
NPHP3-210ENST00000512094 SPRR2GQ9BYE4 73 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 KRTAP2-4Q9BYR9 128 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 KRTAP2-1Q9BYU5 128 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 OR2J1Q9GZK6 312 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 LPAR5Q9H1C0 372 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 CACYBPQ9HB71 228 aaKnown RBP0.06□□□□□ -2.4
NPHP3-210ENST00000512094 PARVGQ9HBI0 331 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 BIN3Q9NQY0 253 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 NAT8BQ9UHF3 227 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 SSR3Q9UNL2 185 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 TPRKBQ9Y3C4 175 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 BCORL1Q5H9F3 1711 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 MCM3APO60318 1980 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 CACNA1CQ13936 2221 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 SPAG17Q6Q759 2223 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 NSD1Q96L73 2696 aaPredicted RBP0.06□□□□□ -2.4
NPHP3-210ENST00000512094 CITO14578 2027 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 HECW2Q9P2P5 1572 aa0.06□□□□□ -2.4
NPHP3-210ENST00000512094 HECW1Q76N89 1606 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 POLQO75417 2590 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 MGAMO43451 1857 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 SBF1O95248 1867 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 MYO5AQ9Y4I1 1855 aaKnown RBP0.05□□□□□ -2.4
NPHP3-210ENST00000512094 MEGF8Q7Z7M0 2845 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 PIK3C2GO75747 1445 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 UNC79Q9P2D8 2635 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 MYH7BA7E2Y1 1941 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 PTPRFP10586 1907 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 HIVEP3Q5T1R4 2406 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 ABCA2Q9BZC7 2435 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 COL1A1P02452 1464 aaPredicted RBP0.05□□□□□ -2.4
NPHP3-210ENST00000512094 LOC285556D6RIA3 1793 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 TRBV19A0A075B6N1 114 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 A0A087WSZ3 146 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 TRAV4A0A0B4J268 109 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 C3orf85A0A1B0GTC6 90 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 ARL5CA6NH57 179 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 RIIAD1A6NNX1 92 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 F2Z2F3 143 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 H7C1C5 153 aa0.05□□□□□ -2.4
NPHP3-210ENST00000512094 K7ERJ3 54 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms